Analysis of interatomic Contacts of Structural Units in PDB entry:
9LPB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LPB entry

There is 1 chain in PDB entry 9LPB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 10ARG 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9LPB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 52Right-handed alpha
Helix 2
AA2
A
53 56Right-handed 310
Helix 3
AA3
A
58 68Right-handed alpha
Helix 4
AA4
A
69 78Right-handed alpha
Helix 5
AA5
A
82 104Right-handed alpha
Helix 6
AA6
A
105 112Right-handed alpha
Helix 7
AA7
A
112 128Right-handed alpha
Helix 8
AA8
A
132 134Right-handed 310
Helix 9
AA9
A
135 151Right-handed alpha
Helix 10
AB1
A
154 180Right-handed alpha
Helix 11
AB2
A
186 198Right-handed alpha
Helix 12
AB3
A
199 212Right-handed alpha
Helix 13
AB4
A
215 222Right-handed alpha
Helix 14
AB5
A
222 250Right-handed alpha
Helix 15
AB6
A
256 264Right-handed alpha
Helix 16
AB7
A
268 297Right-handed alpha
Helix 17
AB8
A
298 301Right-handed 310
Helix 18
AB9
A
302 326Right-handed alpha
Helix 19
AC1
A
326 331Right-handed alpha
Helix 20
AC2
A
357 361Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9LPB.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 22first strand
Strand 2
A
342 346anti-parallel
Strand 3
A
351 353anti-parallel
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