Analysis of interatomic Contacts of Structural Units in PDB entry:
9LT9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LT9 entry

There is 1 chain in PDB entry 9LT9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 216PRO 508
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9LT9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
216 220Right-handed 310
Helix 2
AA2
A
224 243Right-handed alpha
Helix 3
AA3
A
243 249Right-handed alpha
Helix 4
AA4
A
250 265Right-handed alpha
Helix 5
AA5
A
266 271Right-handed 310
Helix 6
AA6
A
274 296Right-handed alpha
Helix 7
AA7
A
296 319Right-handed alpha
Helix 8
AA8
A
322 324Right-handed 310
Helix 9
AA9
A
325 340Right-handed alpha
Helix 10
AB1
A
342 355Right-handed alpha
Helix 11
AB2
A
356 360Right-handed 310
Helix 12
AB3
A
367 374Right-handed alpha
Helix 13
AB4
A
385 405Right-handed alpha
Helix 14
AB5
A
411 414Right-handed 310
Helix 15
AB6
A
415 428Right-handed alpha
Helix 16
AB7
A
430 434Right-handed 310
Helix 17
AB8
A
435 470Right-handed alpha
Helix 18
AB9
A
470 476Right-handed alpha
Helix 19
AC1
A
477 480Right-handed 310
Helix 20
AC2
A
481 498Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9LT9.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 379first strand
Strand 2
A
382 383anti-parallel
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