Analysis of interatomic Contacts of Structural Units in PDB entry:
9LUB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LUB entry

There are 7 chains in PDB entry 9LUB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 246
B
 MET 1THR 246
C
 MET 1THR 246
D
 MET 1THR 246
E
 MET 1THR 246
F
 PRO 14SER 60
G
 GLY 12SER 60
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 9LUB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 22Right-handed alpha
Helix 2
AA2
A
26 31Right-handed alpha
Helix 3
AA3
A
32 51Right-handed alpha
Helix 4
AA4
A
52 57Right-handed alpha
Helix 5
AA5
A
58 68Right-handed alpha
Helix 6
AA6
A
73 101Right-handed alpha
Helix 7
AA7
A
105 117Right-handed alpha
Helix 8
AA8
A
120 171Right-handed alpha
Helix 9
AA9
A
177 186Right-handed alpha
Helix 10
AB1
A
186 199Right-handed alpha
Helix 11
AB2
A
199 230Right-handed alpha
Helix 12
AB3
A
233 242Right-handed alpha
Helix 13
AB4
A
243 245Right-handed 310
Helix 14
AB5
B
2 23Right-handed alpha
Helix 15
AB6
B
26 31Right-handed 310
Helix 16
AB7
B
32 51Right-handed alpha
Helix 17
AB8
B
52 68Right-handed alpha
Helix 18
AB9
B
73 92Right-handed alpha
Helix 19
AC1
B
92 100Right-handed alpha
Helix 20
AC2
B
105 117Right-handed alpha
Helix 21
AC3
B
120 171Right-handed alpha
Helix 22
AC4
B
174 176Right-handed 310
Helix 23
AC5
B
177 199Right-handed alpha
Helix 24
AC6
B
200 231Right-handed alpha
Helix 25
AC7
B
233 243Right-handed alpha
Helix 26
AC8
C
2 23Right-handed alpha
Helix 27
AC9
C
26 31Right-handed alpha
Helix 28
AD1
C
32 51Right-handed alpha
Helix 29
AD2
C
52 67Right-handed alpha
Helix 30
AD3
C
73 92Right-handed alpha
Helix 31
AD4
C
93 101Right-handed alpha
Helix 32
AD5
C
105 117Right-handed alpha
Helix 33
AD6
C
120 169Right-handed alpha
Helix 34
AD7
C
170 172Right-handed 310
Helix 35
AD8
C
177 199Right-handed alpha
Helix 36
AD9
C
199 231Right-handed alpha
Helix 37
AE1
C
233 245Right-handed alpha
Helix 38
AE2
D
2 24Right-handed alpha
Helix 39
AE3
D
26 30Right-handed 310
Helix 40
AE4
D
32 51Right-handed alpha
Helix 41
AE5
D
52 68Right-handed alpha
Helix 42
AE6
D
73 92Right-handed alpha
Helix 43
AE7
D
92 100Right-handed alpha
Helix 44
AE8
D
105 117Right-handed alpha
Helix 45
AE9
D
120 171Right-handed alpha
Helix 46
AF1
D
177 197Right-handed alpha
Helix 47
AF2
D
199 231Right-handed alpha
Helix 48
AF3
D
233 243Right-handed alpha
Helix 49
AF4
E
2 24Right-handed alpha
Helix 50
AF5
E
26 31Right-handed 310
Helix 51
AF6
E
32 51Right-handed alpha
Helix 52
AF7
E
52 67Right-handed alpha
Helix 53
AF8
E
73 91Right-handed alpha
Helix 54
AF9
E
92 101Right-handed alpha
Helix 55
AG1
E
105 117Right-handed alpha
Helix 56
AG2
E
120 171Right-handed alpha
Helix 57
AG3
E
174 199Right-handed alpha
Helix 58
AG4
E
199 231Right-handed alpha
Helix 59
AG5
E
233 243Right-handed alpha
Helix 60
AG6
F
18 37Right-handed alpha
Helix 61
AG7
F
38 40Right-handed 310
Helix 62
AG8
F
43 58Right-handed alpha
Helix 63
AG9
G
14 16Right-handed 310
Helix 64
AH1
G
17 37Right-handed alpha
Helix 65
AH2
G
43 59Right-handed alpha
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There are no sheets in PDB entry 9LUB
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