Analysis of interatomic Contacts of Structural Units in PDB entry:
9LUX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9LUX entry

There are 6 chains in PDB entry 9LUX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	SER 271
B	GLY 2	SER 271
C	GLY 2	SER 271
D	GLY 2	SER 271
E	GLY 2	SER 271
F	GLY 2	SER 271

There are 36 helices in PDB entry 9LUX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	14	Right-handed 310
Helix 2	AA2	A	111	115	Right-handed 310
Helix 3	AA3	A	181	185	Right-handed 310
Helix 4	AA4	A	214	218	Right-handed 310
Helix 5	AA5	A	240	244	Right-handed 310
Helix 6	AA6	A	254	256	Right-handed 310
Helix 7	AA7	B	7	14	Right-handed 310
Helix 8	AA8	B	111	115	Right-handed 310
Helix 9	AA9	B	181	185	Right-handed 310
Helix 10	AB1	B	214	218	Right-handed 310
Helix 11	AB2	B	240	244	Right-handed 310
Helix 12	AB3	B	254	256	Right-handed 310
Helix 13	AB4	C	7	14	Right-handed 310
Helix 14	AB5	C	111	115	Right-handed 310
Helix 15	AB6	C	181	185	Right-handed 310
Helix 16	AB7	C	214	218	Right-handed 310
Helix 17	AB8	C	240	244	Right-handed 310
Helix 18	AB9	C	254	256	Right-handed 310
Helix 19	AC1	D	7	14	Right-handed 310
Helix 20	AC2	D	111	115	Right-handed 310
Helix 21	AC3	D	181	185	Right-handed 310
Helix 22	AC4	D	214	218	Right-handed 310
Helix 23	AC5	D	240	244	Right-handed 310
Helix 24	AC6	D	254	256	Right-handed 310
Helix 25	AC7	E	7	14	Right-handed 310
Helix 26	AC8	E	111	115	Right-handed 310
Helix 27	AC9	E	181	185	Right-handed 310
Helix 28	AD1	E	214	218	Right-handed 310
Helix 29	AD2	E	240	244	Right-handed 310
Helix 30	AD3	E	254	256	Right-handed 310
Helix 31	AD4	F	7	14	Right-handed 310
Helix 32	AD5	F	111	115	Right-handed 310
Helix 33	AD6	F	181	185	Right-handed 310
Helix 34	AD7	F	214	218	Right-handed 310
Helix 35	AD8	F	240	244	Right-handed 310
Helix 36	AD9	F	254	256	Right-handed 310

There are 34 sheets in PDB entry 9LUX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	23	first strand
Strand 2	A	210	212	parallel
Strand 3	A	198	204	anti-parallel
Strand 4	A	187	192	anti-parallel
Strand 5	A	245	252	anti-parallel
Strand 6	A	258	261	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	23	first strand
Strand 2	A	210	212	parallel
Strand 3	A	198	204	anti-parallel
Strand 4	A	187	192	anti-parallel
Strand 5	A	245	252	anti-parallel
Strand 6	A	265	269	anti-parallel
Strand 7	A	156	165	parallel
Strand 8	E	171	178	anti-parallel
Strand 9	E	231	236	anti-parallel
Strand 10	E	221	226	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	35	first strand
Strand 2	A	47	53	anti-parallel
Strand 3	A	102	107	anti-parallel
Strand 4	A	94	99	anti-parallel

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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	86	first strand
Strand 2	A	77	81	anti-parallel
Strand 3	A	65	70	anti-parallel
Strand 4	A	116	122	anti-parallel
Strand 5	A	133	137	anti-parallel
Strand 6	A	38	41	parallel
Strand 7	C	38	41	anti-parallel
Strand 8	C	133	137	parallel
Strand 9	C	116	122	anti-parallel
Strand 10	C	65	70	anti-parallel
Strand 11	C	77	81	anti-parallel
Strand 12	C	85	86	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	129	first strand
Strand 2	A	116	122	anti-parallel
Strand 3	A	133	137	anti-parallel
Strand 4	A	38	41	parallel
Strand 5	C	38	41	anti-parallel
Strand 6	C	133	137	parallel
Strand 7	C	116	122	anti-parallel
Strand 8	C	128	129	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	226	first strand
Strand 2	A	231	236	anti-parallel
Strand 3	A	171	178	anti-parallel
Strand 4	E	157	160	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	23	first strand
Strand 2	B	210	212	parallel
Strand 3	B	198	204	anti-parallel
Strand 4	B	187	192	anti-parallel
Strand 5	B	245	252	anti-parallel
Strand 6	B	258	261	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	23	first strand
Strand 2	B	210	212	parallel
Strand 3	B	198	204	anti-parallel
Strand 4	B	187	192	anti-parallel
Strand 5	B	245	252	anti-parallel
Strand 6	B	265	269	anti-parallel
Strand 7	B	156	165	parallel
Strand 8	F	171	178	anti-parallel
Strand 9	F	231	236	anti-parallel
Strand 10	F	221	226	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	35	first strand
Strand 2	B	47	53	anti-parallel
Strand 3	B	102	107	anti-parallel
Strand 4	B	94	99	anti-parallel

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There are 12 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	86	first strand
Strand 2	B	77	81	anti-parallel
Strand 3	B	65	70	anti-parallel
Strand 4	B	116	122	anti-parallel
Strand 5	B	133	137	anti-parallel
Strand 6	B	38	41	parallel
Strand 7	D	38	41	anti-parallel
Strand 8	D	133	137	parallel
Strand 9	D	116	122	anti-parallel
Strand 10	D	65	70	anti-parallel
Strand 11	D	77	81	anti-parallel
Strand 12	D	85	86	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	129	first strand
Strand 2	B	116	122	anti-parallel
Strand 3	B	133	137	anti-parallel
Strand 4	B	38	41	parallel
Strand 5	D	38	41	anti-parallel
Strand 6	D	133	137	parallel
Strand 7	D	116	122	anti-parallel
Strand 8	D	128	129	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	59	first strand
Strand 2	B	62	63	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	226	first strand
Strand 2	B	231	236	anti-parallel
Strand 3	B	171	178	anti-parallel
Strand 4	F	157	160	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	23	first strand
Strand 2	C	210	212	parallel
Strand 3	C	198	204	anti-parallel
Strand 4	C	187	192	anti-parallel
Strand 5	C	245	252	anti-parallel
Strand 6	C	265	269	anti-parallel
Strand 7	C	163	165	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	23	first strand
Strand 2	C	210	212	parallel
Strand 3	C	198	204	anti-parallel
Strand 4	C	187	192	anti-parallel
Strand 5	C	245	252	anti-parallel
Strand 6	C	258	261	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	35	first strand
Strand 2	C	47	53	anti-parallel
Strand 3	C	102	107	anti-parallel
Strand 4	C	94	99	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	59	first strand
Strand 2	C	62	63	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	176	first strand
Strand 2	C	231	236	anti-parallel
Strand 3	C	221	226	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	210	212	parallel
Strand 3	D	198	204	anti-parallel
Strand 4	D	187	192	anti-parallel
Strand 5	D	245	252	anti-parallel
Strand 6	D	265	269	anti-parallel
Strand 7	D	163	165	parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	210	212	parallel
Strand 3	D	198	204	anti-parallel
Strand 4	D	187	192	anti-parallel
Strand 5	D	245	252	anti-parallel
Strand 6	D	258	261	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	35	first strand
Strand 2	D	47	53	anti-parallel
Strand 3	D	102	107	anti-parallel
Strand 4	D	94	99	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	176	first strand
Strand 2	D	231	236	anti-parallel
Strand 3	D	221	226	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	23	first strand
Strand 2	E	210	212	parallel
Strand 3	E	198	204	anti-parallel
Strand 4	E	187	192	anti-parallel
Strand 5	E	245	252	anti-parallel
Strand 6	E	265	269	anti-parallel
Strand 7	E	163	165	parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	23	first strand
Strand 2	E	210	212	parallel
Strand 3	E	198	204	anti-parallel
Strand 4	E	187	192	anti-parallel
Strand 5	E	245	252	anti-parallel
Strand 6	E	258	261	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	35	first strand
Strand 2	E	47	53	anti-parallel
Strand 3	E	102	107	anti-parallel
Strand 4	E	94	99	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	41	first strand
Strand 2	E	133	137	parallel
Strand 3	E	116	122	anti-parallel
Strand 4	E	65	70	anti-parallel
Strand 5	E	77	81	anti-parallel
Strand 6	E	85	86	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	41	first strand
Strand 2	E	133	137	parallel
Strand 3	E	116	122	anti-parallel
Strand 4	E	128	129	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	59	first strand
Strand 2	E	62	63	anti-parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	24	first strand
Strand 2	F	210	213	parallel
Strand 3	F	198	204	anti-parallel
Strand 4	F	187	192	anti-parallel
Strand 5	F	245	252	anti-parallel
Strand 6	F	265	269	anti-parallel
Strand 7	F	163	165	parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	24	first strand
Strand 2	F	210	213	parallel
Strand 3	F	198	204	anti-parallel
Strand 4	F	187	192	anti-parallel
Strand 5	F	245	252	anti-parallel
Strand 6	F	258	261	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	35	first strand
Strand 2	F	47	53	anti-parallel
Strand 3	F	102	107	anti-parallel
Strand 4	F	94	99	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	38	41	first strand
Strand 2	F	133	137	parallel
Strand 3	F	116	122	anti-parallel
Strand 4	F	65	70	anti-parallel
Strand 5	F	77	81	anti-parallel
Strand 6	F	85	86	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	38	41	first strand
Strand 2	F	133	137	parallel
Strand 3	F	116	122	anti-parallel
Strand 4	F	128	129	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	59	first strand
Strand 2	F	62	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9LUX

Analysis of interatomic Contacts of Structural Units in PDB entry:
9LUX