Analysis of interatomic Contacts of Structural Units in PDB entry:
9LUZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LUZ entry

There is 1 chain in PDB entry 9LUZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7ALA 541
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9LUZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 42Right-handed alpha
Helix 2
AA2
A
48 56Right-handed 310
Helix 3
AA3
A
74 77Right-handed 310
Helix 4
AA4
A
97 101Right-handed 310
Helix 5
AA5
A
124 134Right-handed alpha
Helix 6
AA6
A
140 144Right-handed 310
Helix 7
AA7
A
145 162Right-handed alpha
Helix 8
AA8
A
291 298Right-handed alpha
Helix 9
AA9
A
360 365Right-handed 310
Helix 10
AB1
A
407 411Right-handed 310
Helix 11
AB2
A
534 541Right-handed alpha
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There are 9 sheets in PDB entry 9LUZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
14 15anti-parallel
Strand 3
A
205 211anti-parallel
Strand 4
A
195 199anti-parallel
Strand 5
A
184 188anti-parallel
Strand 6
A
177 181anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 64first strand
Strand 2
A
114 121anti-parallel
Strand 3
A
103 111anti-parallel
Strand 4
A
79 86anti-parallel
Strand 5
A
529 533anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
515 519anti-parallel
Strand 3
A
499 505anti-parallel
Strand 4
A
485 493anti-parallel
Strand 5
A
464 466anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
515 519anti-parallel
Strand 3
A
499 505anti-parallel
Strand 4
A
485 493anti-parallel
Strand 5
A
470 473anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
234 239anti-parallel
Strand 3
A
246 251anti-parallel
Strand 4
A
261 263anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
280 285anti-parallel
Strand 3
A
311 317anti-parallel
Strand 4
A
327 331anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 290first strand
Strand 2
A
303 305anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 345first strand
Strand 2
A
348 356anti-parallel
Strand 3
A
378 385anti-parallel
Strand 4
A
391 395anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 405first strand
Strand 2
A
417 424anti-parallel
Strand 3
A
428 436anti-parallel
Strand 4
A
454 459anti-parallel
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