Analysis of interatomic Contacts of Structural Units in PDB entry:
9LWI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9LWI entry

There are 9 chains in PDB entry 9LWI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 42	MET 1067
B	MET 1	HIS 1140
C	VAL 45	PRO 147
D	PRO 25	GLU 322
E	ARG 80	ARG 294
F	VAL 10	GLU 246
G	LYS 41	ALA 759
H	LYS 19	HIS 108
I	PRO 47	TYR 1072

There are 97 helices in PDB entry 9LWI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	82	93	Right-handed alpha
Helix 2	AA2	A	132	137	Right-handed alpha
Helix 3	AA3	A	167	179	Right-handed alpha
Helix 4	AA4	A	190	198	Right-handed alpha
Helix 5	AA5	A	202	214	Right-handed alpha
Helix 6	AA6	A	215	257	Right-handed alpha
Helix 7	AA7	A	893	952	Right-handed alpha
Helix 8	AA8	A	990	1007	Right-handed alpha
Helix 9	AA9	A	1022	1040	Right-handed alpha
Helix 10	AB1	B	252	256	Right-handed 310
Helix 11	AB2	B	341	345	Right-handed 310
Helix 12	AB3	B	985	990	Right-handed alpha
Helix 13	AB4	B	1044	1062	Right-handed alpha
Helix 14	AB5	B	1069	1075	Right-handed alpha
Helix 15	AB6	B	1091	1096	Right-handed alpha
Helix 16	AB7	B	1097	1099	Right-handed 310
Helix 17	AB8	B	1101	1110	Right-handed alpha
Helix 18	AB9	B	1125	1138	Right-handed alpha
Helix 19	AC1	C	61	63	Right-handed 310
Helix 20	AC2	C	88	99	Right-handed alpha
Helix 21	AC3	C	104	124	Right-handed alpha
Helix 22	AC4	C	126	135	Right-handed alpha
Helix 23	AC5	D	26	54	Right-handed alpha
Helix 24	AC6	D	55	57	Right-handed 310
Helix 25	AC7	D	64	80	Right-handed alpha
Helix 26	AC8	D	82	109	Right-handed alpha
Helix 27	AC9	D	115	127	Right-handed alpha
Helix 28	AD1	D	138	142	Right-handed 310
Helix 29	AD2	D	146	161	Right-handed alpha
Helix 30	AD3	D	215	220	Right-handed alpha
Helix 31	AD4	D	221	224	Right-handed 310
Helix 32	AD5	D	254	269	Right-handed alpha
Helix 33	AD6	D	311	322	Right-handed alpha
Helix 34	AD7	E	81	100	Right-handed alpha
Helix 35	AD8	E	107	115	Right-handed alpha
Helix 36	AD9	E	122	138	Right-handed alpha
Helix 37	AE1	E	176	189	Right-handed alpha
Helix 38	AE2	E	195	204	Right-handed alpha
Helix 39	AE3	E	218	230	Right-handed alpha
Helix 40	AE4	E	251	258	Right-handed alpha
Helix 41	AE5	E	259	266	Right-handed alpha
Helix 42	AE6	E	278	294	Right-handed alpha
Helix 43	AE7	F	12	26	Right-handed alpha
Helix 44	AE8	F	30	45	Right-handed alpha
Helix 45	AE9	F	52	65	Right-handed alpha
Helix 46	AF1	F	93	99	Right-handed alpha
Helix 47	AF2	F	102	119	Right-handed alpha
Helix 48	AF3	F	125	132	Right-handed alpha
Helix 49	AF4	F	142	156	Right-handed alpha
Helix 50	AF5	F	169	184	Right-handed alpha
Helix 51	AF6	F	213	220	Right-handed alpha
Helix 52	AF7	G	57	74	Right-handed alpha
Helix 53	AF8	G	75	77	Right-handed 310
Helix 54	AF9	G	82	94	Right-handed alpha
Helix 55	AG1	G	98	122	Right-handed alpha
Helix 56	AG2	G	127	153	Right-handed alpha
Helix 57	AG3	G	153	161	Right-handed alpha
Helix 58	AG4	G	169	182	Right-handed alpha
Helix 59	AG5	G	186	205	Right-handed alpha
Helix 60	AG6	G	210	224	Right-handed alpha
Helix 61	AG7	G	226	254	Right-handed alpha
Helix 62	AG8	G	255	277	Right-handed alpha
Helix 63	AG9	G	279	281	Right-handed 310
Helix 64	AH1	G	282	295	Right-handed alpha
Helix 65	AH2	G	298	305	Right-handed alpha
Helix 66	AH3	G	306	314	Right-handed alpha
Helix 67	AH4	G	315	329	Right-handed alpha
Helix 68	AH5	G	331	354	Right-handed alpha
Helix 69	AH6	G	354	359	Right-handed alpha
Helix 70	AH7	G	360	379	Right-handed alpha
Helix 71	AH8	G	383	400	Right-handed alpha
Helix 72	AH9	G	403	418	Right-handed alpha
Helix 73	AI1	G	425	443	Right-handed alpha
Helix 74	AI2	G	445	463	Right-handed alpha
Helix 75	AI3	G	468	480	Right-handed alpha
Helix 76	AI4	G	484	516	Right-handed alpha
Helix 77	AI5	G	544	560	Right-handed alpha
Helix 78	AI6	G	593	602	Right-handed alpha
Helix 79	AI7	G	609	618	Right-handed alpha
Helix 80	AI8	G	620	630	Right-handed alpha
Helix 81	AI9	G	669	675	Right-handed alpha
Helix 82	AJ1	G	677	707	Right-handed alpha
Helix 83	AJ2	G	711	723	Right-handed alpha
Helix 84	AJ3	G	728	742	Right-handed alpha
Helix 85	AJ4	H	53	58	Right-handed alpha
Helix 86	AJ5	H	86	91	Right-handed alpha
Helix 87	AJ6	I	85	96	Right-handed alpha
Helix 88	AJ7	I	109	118	Right-handed 310
Helix 89	AJ8	I	157	169	Right-handed alpha
Helix 90	AJ9	I	174	178	Right-handed 310
Helix 91	AK1	I	182	190	Right-handed alpha
Helix 92	AK2	I	191	204	Right-handed alpha
Helix 93	AK3	I	205	241	Right-handed alpha
Helix 94	AK4	I	888	951	Right-handed alpha
Helix 95	AK5	I	992	1005	Right-handed alpha
Helix 96	AK6	I	1005	1011	Right-handed alpha
Helix 97	AK7	I	1026	1041	Right-handed alpha

There are 40 sheets in PDB entry 9LWI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	66	first strand
Strand 2	A	45	52	anti-parallel
Strand 3	A	116	125	anti-parallel
Strand 4	A	139	147	anti-parallel
Strand 5	A	152	157	anti-parallel
Strand 6	A	163	165	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1011	1012	first strand
Strand 2	A	1044	1049	parallel
Strand 3	A	71	75	parallel
Strand 4	A	1064	1066	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	958	961	first strand
Strand 2	A	966	969	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1004	1009	first strand
Strand 2	B	1025	1032	anti-parallel
Strand 3	B	1037	1042	anti-parallel
Strand 4	B	4	10	anti-parallel
Strand 5	B	1088	1090	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	21	first strand
Strand 2	B	30	34	anti-parallel
Strand 3	B	38	45	anti-parallel
Strand 4	B	48	56	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	67	first strand
Strand 2	B	76	80	anti-parallel
Strand 3	B	85	94	anti-parallel
Strand 4	B	97	107	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	124	first strand
Strand 2	B	130	133	anti-parallel
Strand 3	B	139	144	anti-parallel
Strand 4	B	155	158	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	169	first strand
Strand 2	B	177	182	anti-parallel
Strand 3	B	189	196	anti-parallel
Strand 4	B	201	209	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	232	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	247	248	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	263	first strand
Strand 2	B	270	275	anti-parallel
Strand 3	B	279	289	anti-parallel
Strand 4	B	295	307	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	318	first strand
Strand 2	B	321	325	anti-parallel
Strand 3	B	331	336	anti-parallel
Strand 4	B	347	353	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	363	first strand
Strand 2	B	376	379	anti-parallel
Strand 3	B	386	391	anti-parallel
Strand 4	B	711	716	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	402	first strand
Strand 2	B	699	704	anti-parallel
Strand 3	B	690	694	anti-parallel
Strand 4	B	681	682	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	410	411	first strand
Strand 2	B	424	428	anti-parallel
Strand 3	B	433	439	anti-parallel
Strand 4	B	442	445	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	457	463	first strand
Strand 2	B	467	472	anti-parallel
Strand 3	B	476	480	anti-parallel
Strand 4	B	485	490	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	503	first strand
Strand 2	B	507	512	anti-parallel
Strand 3	B	515	522	anti-parallel
Strand 4	B	525	533	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	555	560	anti-parallel
Strand 3	B	567	570	anti-parallel
Strand 4	B	576	578	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	588	595	first strand
Strand 2	B	600	606	anti-parallel
Strand 3	B	610	617	anti-parallel
Strand 4	B	622	623	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	588	595	first strand
Strand 2	B	600	606	anti-parallel
Strand 3	B	610	617	anti-parallel
Strand 4	B	629	630	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	637	642	first strand
Strand 2	B	647	652	anti-parallel
Strand 3	B	657	661	anti-parallel
Strand 4	B	666	670	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	720	727	first strand
Strand 2	B	732	744	anti-parallel
Strand 3	B	748	751	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	720	727	first strand
Strand 2	B	732	744	anti-parallel
Strand 3	B	785	795	anti-parallel
Strand 4	B	801	806	anti-parallel
Strand 5	B	762	765	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	811	819	first strand
Strand 2	B	828	835	anti-parallel
Strand 3	B	846	853	anti-parallel
Strand 4	B	858	866	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	873	876	first strand
Strand 2	B	879	883	anti-parallel
Strand 3	B	888	893	anti-parallel
Strand 4	B	899	905	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	913	917	first strand
Strand 2	B	920	924	anti-parallel
Strand 3	B	930	936	anti-parallel
Strand 4	B	941	948	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	954	958	first strand
Strand 2	B	964	969	anti-parallel
Strand 3	B	973	979	anti-parallel
Strand 4	B	992	998	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	59	first strand
Strand 2	C	141	142	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	140	144	first strand
Strand 2	E	152	156	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	193	194	first strand
Strand 2	E	246	250	anti-parallel
Strand 3	E	233	237	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	29	first strand
Strand 2	F	82	88	anti-parallel
Strand 3	F	69	75	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	159	162	first strand
Strand 2	F	165	168	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	201	203	first strand
Strand 2	F	210	212	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	522	529	first strand
Strand 2	H	22	35	parallel
Strand 3	G	565	580	anti-parallel
Strand 4	G	589	592	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	639	641	first strand
Strand 2	G	654	656	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	745	748	first strand
Strand 2	G	751	757	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	70	72	first strand
Strand 2	H	78	80	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	52	57	first strand
Strand 2	I	120	128	anti-parallel
Strand 3	I	133	141	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1052	1053	first strand
Strand 2	I	78	79	parallel
Strand 3	I	1069	1070	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	974	975	first strand
Strand 2	I	984	985	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1015	1017	first strand
Strand 2	I	1048	1050	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9LWI

Analysis of interatomic Contacts of Structural Units in PDB entry:
9LWI