Analysis of interatomic Contacts of Structural Units in PDB entry:
9LWK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LWK entry

There are 2 chains in PDB entry 9LWK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 361ASN 729
I
 GLU 354LEU 720
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9LWK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
361 386Right-handed alpha
Helix 2
AA2
A
387 392Right-handed alpha
Helix 3
AA3
A
393 396Right-handed 310
Helix 4
AA4
A
398 407Right-handed alpha
Helix 5
AA5
A
408 416Right-handed 310
Helix 6
AA6
A
417 474Right-handed alpha
Helix 7
AA7
A
482 497Right-handed alpha
Helix 8
AA8
A
507 512Right-handed alpha
Helix 9
AA9
A
519 528Right-handed alpha
Helix 10
AB1
A
529 532Right-handed 310
Helix 11
AB2
A
538 553Right-handed alpha
Helix 12
AB3
A
574 578Right-handed 310
Helix 13
AB4
A
587 591Right-handed 310
Helix 14
AB5
A
595 605Right-handed alpha
Helix 15
AB6
A
616 626Right-handed alpha
Helix 16
AB7
A
663 729Right-handed alpha
Helix 17
AB8
I
355 385Right-handed alpha
Helix 18
AB9
I
404 413Right-handed alpha
Helix 19
AC1
I
418 446Right-handed alpha
Helix 20
AC2
I
447 460Right-handed alpha
Helix 21
AC3
I
460 473Right-handed alpha
Helix 22
AC4
I
484 489Right-handed alpha
Helix 23
AC5
I
495 503Right-handed alpha
Helix 24
AC6
I
505 511Right-handed alpha
Helix 25
AC7
I
516 531Right-handed alpha
Helix 26
AC8
I
553 561Right-handed alpha
Helix 27
AC9
I
573 585Right-handed alpha
Helix 28
AD1
I
593 608Right-handed alpha
Helix 29
AD2
I
648 689Right-handed alpha
Helix 30
AD3
I
701 720Right-handed alpha
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There are 4 sheets in PDB entry 9LWK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
534 536first strand
Strand 2
A
562 564parallel
Strand 3
I
630 636anti-parallel
Strand 4
I
617 623anti-parallel
Strand 5
I
611 613anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
611 614first strand
Strand 2
A
635 638parallel
Strand 3
A
643 645anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
512 514first strand
Strand 2
I
537 539parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
564 565first strand
Strand 2
I
590 591anti-parallel
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