Analysis of interatomic Contacts of Structural Units in PDB entry:
9LWL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9LWL entry

There are 10 chains in PDB entry 9LWL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 42	MET 1067
B	MET 1	HIS 1140
C	VAL 45	PRO 147
D	PRO 25	GLU 322
E	ARG 80	ARG 294
F	VAL 10	GLU 246
G	LYS 41	ALA 759
H	LYS 19	HIS 108
I	PRO 47	TYR 1072
J	PHE 14	ARG 146

There are150 helices in PDB entry 9LWL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	83	93	Right-handed alpha
Helix 2	AA2	A	132	137	Right-handed alpha
Helix 3	AA3	A	167	178	Right-handed alpha
Helix 4	AA4	A	190	198	Right-handed alpha
Helix 5	AA5	A	202	215	Right-handed alpha
Helix 6	AA6	A	215	377	Right-handed alpha
Helix 7	AA7	A	377	384	Right-handed alpha
Helix 8	AA8	A	387	392	Right-handed alpha
Helix 9	AA9	A	393	396	Right-handed 310
Helix 10	AB1	A	398	407	Right-handed alpha
Helix 11	AB2	A	408	416	Right-handed 310
Helix 12	AB3	A	417	474	Right-handed alpha
Helix 13	AB4	A	482	497	Right-handed alpha
Helix 14	AB5	A	507	512	Right-handed alpha
Helix 15	AB6	A	519	528	Right-handed alpha
Helix 16	AB7	A	529	532	Right-handed 310
Helix 17	AB8	A	538	553	Right-handed alpha
Helix 18	AB9	A	574	578	Right-handed 310
Helix 19	AC1	A	587	591	Right-handed 310
Helix 20	AC2	A	595	605	Right-handed alpha
Helix 21	AC3	A	616	626	Right-handed alpha
Helix 22	AC4	A	663	727	Right-handed alpha
Helix 23	AC5	A	741	851	Right-handed alpha
Helix 24	AC6	A	863	886	Right-handed alpha
Helix 25	AC7	A	891	952	Right-handed alpha
Helix 26	AC8	A	990	1007	Right-handed alpha
Helix 27	AC9	A	1022	1040	Right-handed alpha
Helix 28	AD1	B	252	256	Right-handed 310
Helix 29	AD2	B	341	345	Right-handed 310
Helix 30	AD3	B	572	575	Right-handed 310
Helix 31	AD4	B	985	991	Right-handed alpha
Helix 32	AD5	B	1044	1062	Right-handed alpha
Helix 33	AD6	B	1091	1097	Right-handed alpha
Helix 34	AD7	B	1098	1100	Right-handed 310
Helix 35	AD8	B	1101	1109	Right-handed alpha
Helix 36	AD9	B	1125	1140	Right-handed alpha
Helix 37	AE1	C	60	64	Right-handed 310
Helix 38	AE2	C	68	72	Right-handed 310
Helix 39	AE3	C	88	99	Right-handed alpha
Helix 40	AE4	C	104	124	Right-handed alpha
Helix 41	AE5	C	126	135	Right-handed alpha
Helix 42	AE6	D	26	54	Right-handed alpha
Helix 43	AE7	D	55	57	Right-handed 310
Helix 44	AE8	D	64	78	Right-handed alpha
Helix 45	AE9	D	82	109	Right-handed alpha
Helix 46	AF1	D	115	128	Right-handed alpha
Helix 47	AF2	D	138	142	Right-handed 310
Helix 48	AF3	D	146	162	Right-handed alpha
Helix 49	AF4	D	215	220	Right-handed alpha
Helix 50	AF5	D	221	224	Right-handed 310
Helix 51	AF6	D	254	269	Right-handed alpha
Helix 52	AF7	D	311	322	Right-handed alpha
Helix 53	AF8	E	81	100	Right-handed alpha
Helix 54	AF9	E	107	115	Right-handed alpha
Helix 55	AG1	E	122	138	Right-handed alpha
Helix 56	AG2	E	176	189	Right-handed alpha
Helix 57	AG3	E	195	204	Right-handed alpha
Helix 58	AG4	E	218	230	Right-handed alpha
Helix 59	AG5	E	251	258	Right-handed alpha
Helix 60	AG6	E	259	266	Right-handed alpha
Helix 61	AG7	E	278	294	Right-handed alpha
Helix 62	AG8	F	12	26	Right-handed alpha
Helix 63	AG9	F	30	45	Right-handed alpha
Helix 64	AH1	F	52	65	Right-handed alpha
Helix 65	AH2	F	93	98	Right-handed alpha
Helix 66	AH3	F	102	119	Right-handed alpha
Helix 67	AH4	F	125	132	Right-handed alpha
Helix 68	AH5	F	142	156	Right-handed alpha
Helix 69	AH6	F	169	184	Right-handed alpha
Helix 70	AH7	F	213	220	Right-handed alpha
Helix 71	AH8	G	54	57	Right-handed 310
Helix 72	AH9	G	58	74	Right-handed alpha
Helix 73	AI1	G	75	77	Right-handed 310
Helix 74	AI2	G	82	94	Right-handed alpha
Helix 75	AI3	G	98	119	Right-handed alpha
Helix 76	AI4	G	120	122	Right-handed 310
Helix 77	AI5	G	127	153	Right-handed alpha
Helix 78	AI6	G	153	160	Right-handed alpha
Helix 79	AI7	G	169	182	Right-handed alpha
Helix 80	AI8	G	186	204	Right-handed alpha
Helix 81	AI9	G	210	224	Right-handed alpha
Helix 82	AJ1	G	226	254	Right-handed alpha
Helix 83	AJ2	G	255	278	Right-handed alpha
Helix 84	AJ3	G	279	281	Right-handed 310
Helix 85	AJ4	G	282	295	Right-handed alpha
Helix 86	AJ5	G	298	305	Right-handed alpha
Helix 87	AJ6	G	306	314	Right-handed alpha
Helix 88	AJ7	G	315	329	Right-handed alpha
Helix 89	AJ8	G	329	354	Right-handed alpha
Helix 90	AJ9	G	355	359	Right-handed 310
Helix 91	AK1	G	360	380	Right-handed alpha
Helix 92	AK2	G	383	399	Right-handed alpha
Helix 93	AK3	G	403	418	Right-handed alpha
Helix 94	AK4	G	425	443	Right-handed alpha
Helix 95	AK5	G	445	463	Right-handed alpha
Helix 96	AK6	G	468	480	Right-handed alpha
Helix 97	AK7	G	484	516	Right-handed alpha
Helix 98	AK8	G	544	560	Right-handed alpha
Helix 99	AK9	G	592	602	Right-handed alpha
Helix 100	AL1	G	603	605	Right-handed 310
Helix 101	AL2	G	609	618	Right-handed alpha
Helix 102	AL3	G	620	630	Right-handed alpha
Helix 103	AL4	G	669	675	Right-handed alpha
Helix 104	AL5	G	677	707	Right-handed alpha
Helix 105	AL6	G	711	723	Right-handed alpha
Helix 106	AL7	G	728	742	Right-handed alpha
Helix 107	AL8	H	53	58	Right-handed alpha
Helix 108	AL9	I	85	97	Right-handed alpha
Helix 109	AM1	I	100	105	Right-handed alpha
Helix 110	AM2	I	109	118	Right-handed 310
Helix 111	AM3	I	157	167	Right-handed alpha
Helix 112	AM4	I	174	178	Right-handed 310
Helix 113	AM5	I	182	190	Right-handed alpha
Helix 114	AM6	I	191	204	Right-handed alpha
Helix 115	AM7	I	205	265	Right-handed alpha
Helix 116	AM8	I	269	281	Right-handed alpha
Helix 117	AM9	I	285	304	Right-handed alpha
Helix 118	AN1	I	307	344	Right-handed alpha
Helix 119	AN2	I	345	347	Right-handed 310
Helix 120	AN3	I	352	360	Right-handed alpha
Helix 121	AN4	I	361	366	Right-handed alpha
Helix 122	AN5	I	369	385	Right-handed alpha
Helix 123	AN6	I	404	413	Right-handed alpha
Helix 124	AN7	I	418	446	Right-handed alpha
Helix 125	AN8	I	447	460	Right-handed alpha
Helix 126	AN9	I	460	473	Right-handed alpha
Helix 127	AO1	I	484	489	Right-handed alpha
Helix 128	AO2	I	495	503	Right-handed alpha
Helix 129	AO3	I	505	511	Right-handed alpha
Helix 130	AO4	I	516	531	Right-handed alpha
Helix 131	AO5	I	553	561	Right-handed alpha
Helix 132	AO6	I	573	585	Right-handed alpha
Helix 133	AO7	I	593	608	Right-handed alpha
Helix 134	AO8	I	648	689	Right-handed alpha
Helix 135	AO9	I	701	721	Right-handed alpha
Helix 136	AP1	I	728	804	Right-handed alpha
Helix 137	AP2	I	807	812	Right-handed alpha
Helix 138	AP3	I	813	818	Right-handed alpha
Helix 139	AP4	I	836	840	Right-handed 310
Helix 140	AP5	I	855	861	Right-handed alpha
Helix 141	AP6	I	864	882	Right-handed alpha
Helix 142	AP7	I	888	950	Right-handed alpha
Helix 143	AP8	I	992	1010	Right-handed alpha
Helix 144	AP9	I	1026	1041	Right-handed alpha
Helix 145	AQ1	I	1063	1067	Right-handed 310
Helix 146	AQ2	J	17	51	Right-handed alpha
Helix 147	AQ3	J	60	93	Right-handed alpha
Helix 148	AQ4	J	99	113	Right-handed alpha
Helix 149	AQ5	J	116	123	Right-handed alpha
Helix 150	AQ6	J	123	141	Right-handed alpha

There are 44 sheets in PDB entry 9LWL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	52	first strand
Strand 2	A	116	125	anti-parallel
Strand 3	A	139	147	anti-parallel
Strand 4	A	152	157	anti-parallel
Strand 5	A	163	165	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1011	1012	first strand
Strand 2	A	1044	1049	parallel
Strand 3	A	72	75	parallel
Strand 4	A	1064	1065	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	536	first strand
Strand 2	A	562	564	parallel
Strand 3	I	630	636	anti-parallel
Strand 4	I	617	623	anti-parallel
Strand 5	I	611	613	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	611	614	first strand
Strand 2	A	635	638	parallel
Strand 3	A	643	645	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	958	961	first strand
Strand 2	A	966	969	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1004	1009	first strand
Strand 2	B	1028	1032	anti-parallel
Strand 3	B	1037	1042	anti-parallel
Strand 4	B	4	10	anti-parallel
Strand 5	B	1088	1090	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	21	first strand
Strand 2	B	30	34	anti-parallel
Strand 3	B	38	43	anti-parallel
Strand 4	B	50	56	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	67	first strand
Strand 2	B	76	80	anti-parallel
Strand 3	B	85	94	anti-parallel
Strand 4	B	97	107	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	124	first strand
Strand 2	B	130	136	anti-parallel
Strand 3	B	139	144	anti-parallel
Strand 4	B	155	158	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	169	first strand
Strand 2	B	177	182	anti-parallel
Strand 3	B	189	196	anti-parallel
Strand 4	B	201	209	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	232	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	247	248	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	263	first strand
Strand 2	B	270	275	anti-parallel
Strand 3	B	279	289	anti-parallel
Strand 4	B	295	307	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	318	first strand
Strand 2	B	321	325	anti-parallel
Strand 3	B	331	336	anti-parallel
Strand 4	B	347	353	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	363	first strand
Strand 2	B	376	379	anti-parallel
Strand 3	B	386	391	anti-parallel
Strand 4	B	711	716	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	402	first strand
Strand 2	B	699	704	anti-parallel
Strand 3	B	691	694	anti-parallel
Strand 4	B	678	681	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	413	first strand
Strand 2	B	424	429	anti-parallel
Strand 3	B	433	439	anti-parallel
Strand 4	B	442	445	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	457	463	first strand
Strand 2	B	467	472	anti-parallel
Strand 3	B	476	480	anti-parallel
Strand 4	B	486	490	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	503	first strand
Strand 2	B	507	512	anti-parallel
Strand 3	B	515	521	anti-parallel
Strand 4	B	526	533	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	555	560	anti-parallel
Strand 3	B	567	570	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	588	595	first strand
Strand 2	B	600	606	anti-parallel
Strand 3	B	610	617	anti-parallel
Strand 4	B	622	623	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	588	595	first strand
Strand 2	B	600	606	anti-parallel
Strand 3	B	610	617	anti-parallel
Strand 4	B	628	630	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	637	642	first strand
Strand 2	B	647	652	anti-parallel
Strand 3	B	657	661	anti-parallel
Strand 4	B	666	670	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	720	727	first strand
Strand 2	B	732	744	anti-parallel
Strand 3	B	748	751	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	720	727	first strand
Strand 2	B	732	744	anti-parallel
Strand 3	B	785	795	anti-parallel
Strand 4	B	801	806	anti-parallel
Strand 5	B	763	765	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	811	819	first strand
Strand 2	B	828	835	anti-parallel
Strand 3	B	846	853	anti-parallel
Strand 4	B	858	866	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	873	876	first strand
Strand 2	B	879	883	anti-parallel
Strand 3	B	888	893	anti-parallel
Strand 4	B	899	905	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	913	917	first strand
Strand 2	B	920	924	anti-parallel
Strand 3	B	930	936	anti-parallel
Strand 4	B	941	944	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	956	961	first strand
Strand 2	B	964	968	anti-parallel
Strand 3	B	974	979	anti-parallel
Strand 4	B	992	998	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1076	1077	first strand
Strand 2	B	1082	1083	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	140	144	first strand
Strand 2	E	152	156	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	193	194	first strand
Strand 2	E	246	248	anti-parallel
Strand 3	E	236	237	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	29	first strand
Strand 2	F	82	88	anti-parallel
Strand 3	F	69	75	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	159	162	first strand
Strand 2	F	165	168	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	201	203	first strand
Strand 2	F	210	212	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	525	529	first strand
Strand 2	H	29	35	parallel
Strand 3	G	565	570	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	578	579	first strand
Strand 2	G	588	589	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	639	641	first strand
Strand 2	G	654	656	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	745	748	first strand
Strand 2	G	751	757	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	70	71	first strand
Strand 2	H	79	80	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	52	56	first strand
Strand 2	I	120	128	anti-parallel
Strand 3	I	133	141	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1015	1017	first strand
Strand 2	I	1048	1053	parallel
Strand 3	I	76	79	parallel
Strand 4	I	1069	1070	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	512	514	first strand
Strand 2	I	537	539	parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	564	565	first strand
Strand 2	I	590	591	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	974	975	first strand
Strand 2	I	984	985	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9LWL

Analysis of interatomic Contacts of Structural Units in PDB entry:
9LWL