Analysis of interatomic Contacts of Structural Units in PDB entry:
9LWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LWV entry

There are 4 chains in PDB entry 9LWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5ILE 289
B
 LYS 9ILE 289
C
 LEU 4ILE 289
D
 ILE 11ILE 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 9LWV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 8Right-handed 310
Helix 2
AA2
A
9 21Right-handed alpha
Helix 3
AA3
A
28 43Right-handed alpha
Helix 4
AA4
A
72 87Right-handed alpha
Helix 5
AA5
A
96 104Right-handed alpha
Helix 6
AA6
A
108 112Right-handed 310
Helix 7
AA7
A
139 151Right-handed alpha
Helix 8
AA8
A
154 160Right-handed alpha
Helix 9
AA9
A
189 191Right-handed 310
Helix 10
AB1
A
193 204Right-handed alpha
Helix 11
AB2
A
205 210Right-handed alpha
Helix 12
AB3
A
211 213Right-handed 310
Helix 13
AB4
A
237 239Right-handed 310
Helix 14
AB5
A
240 245Right-handed alpha
Helix 15
AB6
A
248 260Right-handed alpha
Helix 16
AB7
B
10 21Right-handed alpha
Helix 17
AB8
B
28 43Right-handed alpha
Helix 18
AB9
B
72 87Right-handed alpha
Helix 19
AC1
B
96 104Right-handed alpha
Helix 20
AC2
B
139 150Right-handed alpha
Helix 21
AC3
B
154 160Right-handed alpha
Helix 22
AC4
B
189 191Right-handed 310
Helix 23
AC5
B
193 204Right-handed alpha
Helix 24
AC6
B
205 210Right-handed alpha
Helix 25
AC7
B
211 213Right-handed 310
Helix 26
AC8
B
237 239Right-handed 310
Helix 27
AC9
B
240 245Right-handed alpha
Helix 28
AD1
B
248 260Right-handed alpha
Helix 29
AD2
B
272 277Right-handed alpha
Helix 30
AD3
C
5 8Right-handed 310
Helix 31
AD4
C
9 21Right-handed alpha
Helix 32
AD5
C
28 43Right-handed alpha
Helix 33
AD6
C
72 87Right-handed alpha
Helix 34
AD7
C
96 104Right-handed alpha
Helix 35
AD8
C
108 112Right-handed 310
Helix 36
AD9
C
139 151Right-handed alpha
Helix 37
AE1
C
154 160Right-handed alpha
Helix 38
AE2
C
188 192Right-handed alpha
Helix 39
AE3
C
193 204Right-handed alpha
Helix 40
AE4
C
205 210Right-handed alpha
Helix 41
AE5
C
211 213Right-handed 310
Helix 42
AE6
C
237 239Right-handed 310
Helix 43
AE7
C
240 245Right-handed alpha
Helix 44
AE8
C
248 260Right-handed alpha
Helix 45
AE9
C
273 276Right-handed 310
Helix 46
AF1
D
12 21Right-handed alpha
Helix 47
AF2
D
28 43Right-handed alpha
Helix 48
AF3
D
76 87Right-handed alpha
Helix 49
AF4
D
96 104Right-handed alpha
Helix 50
AF5
D
140 150Right-handed alpha
Helix 51
AF6
D
154 160Right-handed alpha
Helix 52
AF7
D
189 191Right-handed 310
Helix 53
AF8
D
193 204Right-handed alpha
Helix 54
AF9
D
205 210Right-handed alpha
Helix 55
AG1
D
251 260Right-handed alpha
Helix 56
AG2
D
272 276Right-handed alpha
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There are 4 sheets in PDB entry 9LWV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 55first strand
Strand 2
A
58 68anti-parallel
Strand 3
A
115 120anti-parallel
Strand 4
A
129 136anti-parallel
Strand 5
A
166 173anti-parallel
Strand 6
A
178 187anti-parallel
Strand 7
A
215 223anti-parallel
Strand 8
A
228 235anti-parallel
Strand 9
A
265 271anti-parallel
Strand 10
A
282 289anti-parallel
Strand 11
A
47 55anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 55first strand
Strand 2
B
58 68anti-parallel
Strand 3
B
115 120anti-parallel
Strand 4
B
129 137anti-parallel
Strand 5
B
165 173anti-parallel
Strand 6
B
178 187anti-parallel
Strand 7
B
215 222anti-parallel
Strand 8
B
229 235anti-parallel
Strand 9
B
265 271anti-parallel
Strand 10
B
282 289anti-parallel
Strand 11
B
47 55anti-parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
178 183first strand
Strand 2
C
167 173anti-parallel
Strand 3
C
129 135anti-parallel
Strand 4
C
115 120anti-parallel
Strand 5
C
58 68anti-parallel
Strand 6
C
47 55anti-parallel
Strand 7
C
282 289anti-parallel
Strand 8
C
265 271anti-parallel
Strand 9
C
230 235anti-parallel
Strand 10
C
215 221anti-parallel
Strand 11
C
185 187anti-parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 53first strand
Strand 2
D
60 68anti-parallel
Strand 3
D
115 120anti-parallel
Strand 4
D
129 136anti-parallel
Strand 5
D
166 173anti-parallel
Strand 6
D
178 187anti-parallel
Strand 7
D
217 219anti-parallel
Strand 8
D
230 234anti-parallel
Strand 9
D
265 271anti-parallel
Strand 10
D
284 289anti-parallel
Strand 11
D
47 53anti-parallel
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