Analysis of interatomic Contacts of Structural Units in PDB entry:
9LXL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9LXL entry

There is 1 chain in PDB entry 9LXL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3LYS 585
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9LXL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 16Right-handed alpha
Helix 2
AA2
A
22 29Right-handed alpha
Helix 3
AA3
A
37 41Right-handed 310
Helix 4
AA4
A
48 53Right-handed alpha
Helix 5
AA5
A
58 68Right-handed alpha
Helix 6
AA6
A
75 82Right-handed alpha
Helix 7
AA7
A
97 101Right-handed 310
Helix 8
AA8
A
105 116Right-handed alpha
Helix 9
AA9
A
151 163Right-handed alpha
Helix 10
AB1
A
174 178Right-handed 310
Helix 11
AB2
A
189 196Right-handed alpha
Helix 12
AB3
A
200 220Right-handed alpha
Helix 13
AB4
A
246 265Right-handed alpha
Helix 14
AB5
A
322 336Right-handed alpha
Helix 15
AB6
A
353 375Right-handed alpha
Helix 16
AB7
A
433 440Right-handed 310
Helix 17
AB8
A
442 444Right-handed 310
Helix 18
AB9
A
526 534Right-handed alpha
Helix 19
AC1
A
536 540Right-handed 310
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There are 6 sheets in PDB entry 9LXL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
120 126parallel
Strand 3
A
166 171parallel
Strand 4
A
223 226parallel
Strand 5
A
269 273parallel
Strand 6
A
285 289parallel
Strand 7
A
301 306parallel
Strand 8
A
338 344parallel
Strand 9
A
30 34parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
90 91anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 385first strand
Strand 2
A
406 410anti-parallel
Strand 3
A
416 421anti-parallel
Strand 4
A
486 492anti-parallel
Strand 5
A
446 452anti-parallel
Strand 6
A
459 461anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 432first strand
Strand 2
A
472 475anti-parallel
Strand 3
A
464 467anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 520first strand
Strand 2
A
505 508anti-parallel
Strand 3
A
542 545anti-parallel
Strand 4
A
569 572anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 525first strand
Strand 2
A
580 584anti-parallel
Strand 3
A
550 554anti-parallel
Strand 4
A
563 566anti-parallel
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