Analysis of interatomic Contacts of Structural Units in PDB entry:
9LZH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9LZH entry

There are 3 chains in PDB entry 9LZH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 21	GLU 1225
B	GLN 21	GLU 1225
C	GLN 21	GLU 1225

There are 83 helices in PDB entry 9LZH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	40	47	Right-handed alpha
Helix 2	AA2	A	110	115	Right-handed 310
Helix 3	AA3	A	228	236	Right-handed alpha
Helix 4	AA4	A	274	278	Right-handed 310
Helix 5	AA5	A	347	357	Right-handed alpha
Helix 6	AA6	A	390	395	Right-handed alpha
Helix 7	AA7	A	415	422	Right-handed alpha
Helix 8	AA8	A	434	439	Right-handed alpha
Helix 9	AA9	A	467	473	Right-handed alpha
Helix 10	AB1	A	596	600	Right-handed 310
Helix 11	AB2	A	683	691	Right-handed alpha
Helix 12	AB3	A	696	701	Right-handed alpha
Helix 13	AB4	A	804	811	Right-handed alpha
Helix 14	AB5	A	813	821	Right-handed alpha
Helix 15	AB6	A	822	824	Right-handed 310
Helix 16	AB7	A	825	852	Right-handed alpha
Helix 17	AB8	A	870	874	Right-handed 310
Helix 18	AB9	A	887	897	Right-handed alpha
Helix 19	AC1	A	906	915	Right-handed alpha
Helix 20	AC2	A	922	924	Right-handed 310
Helix 21	AC3	A	925	930	Right-handed alpha
Helix 22	AC4	A	939	956	Right-handed alpha
Helix 23	AC5	A	970	979	Right-handed alpha
Helix 24	AC6	A	992	1006	Right-handed alpha
Helix 25	AC7	A	1007	1010	Right-handed 310
Helix 26	AC8	A	1015	1026	Right-handed alpha
Helix 27	AC9	A	1026	1041	Right-handed alpha
Helix 28	AD1	A	1049	1057	Right-handed alpha
Helix 29	AD2	A	1058	1105	Right-handed alpha
Helix 30	AD3	B	40	47	Right-handed alpha
Helix 31	AD4	B	110	115	Right-handed 310
Helix 32	AD5	B	227	236	Right-handed alpha
Helix 33	AD6	B	347	356	Right-handed alpha
Helix 34	AD7	B	390	395	Right-handed 310
Helix 35	AD8	B	415	421	Right-handed alpha
Helix 36	AD9	B	436	440	Right-handed 310
Helix 37	AE1	B	454	456	Right-handed 310
Helix 38	AE2	B	457	462	Right-handed alpha
Helix 39	AE3	B	468	473	Right-handed alpha
Helix 40	AE4	B	683	690	Right-handed alpha
Helix 41	AE5	B	696	703	Right-handed alpha
Helix 42	AE6	B	804	811	Right-handed alpha
Helix 43	AE7	B	813	821	Right-handed alpha
Helix 44	AE8	B	822	824	Right-handed 310
Helix 45	AE9	B	825	852	Right-handed alpha
Helix 46	AF1	B	887	897	Right-handed alpha
Helix 47	AF2	B	906	915	Right-handed alpha
Helix 48	AF3	B	920	925	Right-handed alpha
Helix 49	AF4	B	925	930	Right-handed alpha
Helix 50	AF5	B	939	957	Right-handed alpha
Helix 51	AF6	B	970	983	Right-handed alpha
Helix 52	AF7	B	992	1006	Right-handed alpha
Helix 53	AF8	B	1015	1041	Right-handed alpha
Helix 54	AF9	B	1049	1057	Right-handed alpha
Helix 55	AG1	B	1058	1105	Right-handed alpha
Helix 56	AG2	C	40	47	Right-handed alpha
Helix 57	AG3	C	110	115	Right-handed 310
Helix 58	AG4	C	228	236	Right-handed alpha
Helix 59	AG5	C	347	357	Right-handed alpha
Helix 60	AG6	C	415	421	Right-handed alpha
Helix 61	AG7	C	434	439	Right-handed alpha
Helix 62	AG8	C	454	456	Right-handed 310
Helix 63	AG9	C	457	462	Right-handed alpha
Helix 64	AH1	C	468	473	Right-handed alpha
Helix 65	AH2	C	531	535	Right-handed 310
Helix 66	AH3	C	595	600	Right-handed 310
Helix 67	AH4	C	683	690	Right-handed alpha
Helix 68	AH5	C	696	705	Right-handed alpha
Helix 69	AH6	C	804	811	Right-handed alpha
Helix 70	AH7	C	813	822	Right-handed alpha
Helix 71	AH8	C	825	852	Right-handed alpha
Helix 72	AH9	C	870	874	Right-handed 310
Helix 73	AI1	C	887	897	Right-handed alpha
Helix 74	AI2	C	906	914	Right-handed alpha
Helix 75	AI3	C	925	930	Right-handed alpha
Helix 76	AI4	C	939	956	Right-handed alpha
Helix 77	AI5	C	970	981	Right-handed alpha
Helix 78	AI6	C	985	990	Right-handed alpha
Helix 79	AI7	C	992	1006	Right-handed alpha
Helix 80	AI8	C	1007	1010	Right-handed 310
Helix 81	AI9	C	1015	1038	Right-handed alpha
Helix 82	AJ1	C	1049	1057	Right-handed alpha
Helix 83	AJ2	C	1058	1105	Right-handed alpha

There are 51 sheets in PDB entry 9LZH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	39	first strand
Strand 2	A	107	109	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	282	289	parallel
Strand 3	A	267	272	anti-parallel
Strand 4	A	259	264	anti-parallel
Strand 5	A	122	126	anti-parallel
Strand 6	A	316	332	anti-parallel
Strand 7	A	88	92	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	81	first strand
Strand 2	A	316	332	anti-parallel
Strand 3	A	338	343	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	249	first strand
Strand 2	A	185	195	anti-parallel
Strand 3	A	174	180	anti-parallel
Strand 4	A	154	157	anti-parallel
Strand 5	A	297	300	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	162	first strand
Strand 2	A	168	171	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	212	214	first strand
Strand 2	A	303	305	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	364	367	first strand
Strand 2	A	665	668	anti-parallel
Strand 3	A	675	680	anti-parallel
Strand 4	A	716	719	anti-parallel
Strand 5	A	711	713	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	378	381	first strand
Strand 2	A	609	613	parallel
Strand 3	A	616	624	anti-parallel
Strand 4	A	653	658	anti-parallel
Strand 5	A	643	647	anti-parallel
Strand 6	A	636	637	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	405	409	first strand
Strand 2	A	445	452	anti-parallel
Strand 3	A	573	581	anti-parallel
Strand 4	A	482	489	anti-parallel
Strand 5	A	423	431	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	414	first strand
Strand 2	A	590	591	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	520	first strand
Strand 2	A	501	511	anti-parallel
Strand 3	A	558	566	anti-parallel
Strand 4	A	544	549	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	722	728	first strand
Strand 2	A	757	761	parallel
Strand 3	A	739	742	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	767	769	first strand
Strand 2	B	856	858	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1195	1196	first strand
Strand 2	A	1186	1189	anti-parallel
Strand 3	A	1169	1172	anti-parallel
Strand 4	A	1145	1151	anti-parallel
Strand 5	A	777	782	anti-parallel
Strand 6	B	966	968	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	786	795	first strand
Strand 2	A	1132	1141	anti-parallel
Strand 3	A	1120	1129	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	801	803	first strand
Strand 2	A	931	933	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	856	858	first strand
Strand 2	C	767	769	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	966	968	first strand
Strand 2	C	777	795	anti-parallel
Strand 3	C	1132	1150	anti-parallel
Strand 4	C	1120	1129	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1203	1206	first strand
Strand 2	A	1163	1166	anti-parallel
Strand 3	A	1154	1156	anti-parallel
Strand 4	A	1213	1215	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	39	first strand
Strand 2	B	107	109	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	282	289	parallel
Strand 3	B	267	272	anti-parallel
Strand 4	B	258	264	anti-parallel
Strand 5	B	122	126	anti-parallel
Strand 6	B	316	332	anti-parallel
Strand 7	B	88	92	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	81	first strand
Strand 2	B	316	332	anti-parallel
Strand 3	B	338	343	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	118	first strand
Strand 2	B	297	300	anti-parallel
Strand 3	B	154	157	anti-parallel
Strand 4	B	174	180	anti-parallel
Strand 5	B	185	195	anti-parallel
Strand 6	B	237	249	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	162	first strand
Strand 2	B	168	171	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	367	first strand
Strand 2	B	665	668	anti-parallel
Strand 3	B	675	680	anti-parallel
Strand 4	B	716	719	anti-parallel
Strand 5	B	710	712	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	380	381	first strand
Strand 2	B	609	613	parallel
Strand 3	B	616	624	anti-parallel
Strand 4	B	653	658	anti-parallel
Strand 5	B	645	647	anti-parallel
Strand 6	B	635	636	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	409	first strand
Strand 2	B	445	452	anti-parallel
Strand 3	B	573	581	anti-parallel
Strand 4	B	482	489	anti-parallel
Strand 5	B	423	431	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	414	first strand
Strand 2	B	589	591	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	517	520	first strand
Strand 2	B	501	511	anti-parallel
Strand 3	B	558	566	anti-parallel
Strand 4	B	544	549	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	727	728	first strand
Strand 2	B	757	761	parallel
Strand 3	B	739	742	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	767	769	first strand
Strand 2	C	856	858	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1129	first strand
Strand 2	B	1132	1150	anti-parallel
Strand 3	B	1169	1173	anti-parallel
Strand 4	B	1186	1189	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1129	first strand
Strand 2	B	1132	1150	anti-parallel
Strand 3	B	777	795	anti-parallel
Strand 4	C	966	968	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	801	803	first strand
Strand 2	B	931	933	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	864	865	first strand
Strand 2	B	868	869	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1203	1206	first strand
Strand 2	B	1163	1166	anti-parallel
Strand 3	B	1154	1155	anti-parallel
Strand 4	B	1213	1214	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	39	first strand
Strand 2	C	107	109	parallel

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There are 7 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	62	first strand
Strand 2	C	282	289	parallel
Strand 3	C	267	272	anti-parallel
Strand 4	C	258	264	anti-parallel
Strand 5	C	122	127	anti-parallel
Strand 6	C	317	332	anti-parallel
Strand 7	C	88	91	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	81	first strand
Strand 2	C	317	332	anti-parallel
Strand 3	C	338	343	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	237	249	first strand
Strand 2	C	185	195	anti-parallel
Strand 3	C	174	180	anti-parallel
Strand 4	C	154	157	anti-parallel
Strand 5	C	297	300	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	162	first strand
Strand 2	C	168	171	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	364	367	first strand
Strand 2	C	665	668	anti-parallel
Strand 3	C	675	680	anti-parallel
Strand 4	C	716	719	anti-parallel
Strand 5	C	711	712	anti-parallel

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There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	378	381	first strand
Strand 2	C	609	613	parallel
Strand 3	C	616	624	anti-parallel
Strand 4	C	653	658	anti-parallel
Strand 5	C	643	647	anti-parallel
Strand 6	C	635	637	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	396	397	first strand
Strand 2	C	495	496	parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	405	409	first strand
Strand 2	C	445	451	anti-parallel
Strand 3	C	573	581	anti-parallel
Strand 4	C	482	489	anti-parallel
Strand 5	C	423	431	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	413	414	first strand
Strand 2	C	590	591	parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	517	520	first strand
Strand 2	C	501	511	anti-parallel
Strand 3	C	558	566	anti-parallel
Strand 4	C	544	549	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	727	728	first strand
Strand 2	C	757	761	parallel
Strand 3	C	739	742	anti-parallel
Strand 4	C	733	734	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	801	803	first strand
Strand 2	C	931	933	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1203	1206	first strand
Strand 2	C	1163	1166	anti-parallel
Strand 3	C	1154	1156	anti-parallel
Strand 4	C	1213	1215	parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1169	1172	first strand
Strand 2	C	1186	1189	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9LZH

Analysis of interatomic Contacts of Structural Units in PDB entry:
9LZH