Analysis of interatomic Contacts of Structural Units in PDB entry:
9M0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M0A entry

There are 2 chains in PDB entry 9M0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASN 29PRO 305
A
 LEU 27PRO 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 9M0A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
45 68Right-handed alpha
Helix 2
AA2
B
96 100Right-handed 310
Helix 3
AA3
B
101 104Right-handed 310
Helix 4
AA4
B
126 139Right-handed alpha
Helix 5
AA5
B
150 157Right-handed alpha
Helix 6
AA6
B
168 174Right-handed 310
Helix 7
AA7
B
189 192Right-handed 310
Helix 8
AA8
B
193 201Right-handed alpha
Helix 9
AA9
B
220 246Right-handed alpha
Helix 10
AB1
B
257 269Right-handed alpha
Helix 11
AB2
B
270 290Right-handed alpha
Helix 12
AB3
B
291 295Right-handed 310
Helix 13
AB4
A
45 68Right-handed alpha
Helix 14
AB5
A
96 100Right-handed 310
Helix 15
AB6
A
101 104Right-handed 310
Helix 16
AB7
A
125 139Right-handed alpha
Helix 17
AB8
A
150 157Right-handed alpha
Helix 18
AB9
A
168 174Right-handed 310
Helix 19
AC1
A
189 201Right-handed alpha
Helix 20
AC2
A
220 246Right-handed alpha
Helix 21
AC3
A
257 269Right-handed alpha
Helix 22
AC4
A
270 290Right-handed alpha
Helix 23
AC5
A
291 295Right-handed 310
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There are 3 sheets in PDB entry 9M0A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 118first strand
Strand 2
B
106 109anti-parallel
Strand 3
B
87 90anti-parallel
Strand 4
B
76 80anti-parallel
Strand 5
B
144 148anti-parallel
Strand 6
B
213 218anti-parallel
Strand 7
B
206 209anti-parallel
Strand 8
B
177 179parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
A
31 32anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
106 109anti-parallel
Strand 3
A
87 90anti-parallel
Strand 4
A
76 80anti-parallel
Strand 5
A
144 148anti-parallel
Strand 6
A
213 218anti-parallel
Strand 7
A
206 209anti-parallel
Strand 8
A
177 179parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il