Analysis of interatomic Contacts of Structural Units in PDB entry:
9M0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M0F entry

There are 8 chains in PDB entry 9M0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 60PRO 165
B
 ASN 61THR 166
C
 SER 351MET 457
D
 SER 351MET 457
E
 SER 1GLY 4
E
 GLN 6GLY 8
F
 SER 1GLY 4
F
 GLN 6GLY 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9M0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 69Right-handed alpha
Helix 2
AA2
A
69 76Right-handed alpha
Helix 3
AA3
A
80 84Right-handed 310
Helix 4
AA4
A
96 101Right-handed alpha
Helix 5
AA5
A
106 116Right-handed alpha
Helix 6
AA6
A
121 140Right-handed alpha
Helix 7
AA7
A
144 162Right-handed alpha
Helix 8
AA8
B
62 69Right-handed alpha
Helix 9
AA9
B
69 76Right-handed alpha
Helix 10
AB1
B
80 84Right-handed 310
Helix 11
AB2
B
96 101Right-handed alpha
Helix 12
AB3
B
106 116Right-handed alpha
Helix 13
AB4
B
121 140Right-handed alpha
Helix 14
AB5
B
144 163Right-handed alpha
Helix 15
AB6
C
352 365Right-handed alpha
Helix 16
AB7
C
366 368Right-handed 310
Helix 17
AB8
C
369 374Right-handed alpha
Helix 18
AB9
C
375 377Right-handed 310
Helix 19
AC1
C
389 394Right-handed alpha
Helix 20
AC2
C
399 409Right-handed alpha
Helix 21
AC3
C
414 433Right-handed alpha
Helix 22
AC4
C
437 456Right-handed alpha
Helix 23
AC5
D
352 365Right-handed alpha
Helix 24
AC6
D
366 368Right-handed 310
Helix 25
AC7
D
369 374Right-handed alpha
Helix 26
AC8
D
375 377Right-handed 310
Helix 27
AC9
D
389 394Right-handed alpha
Helix 28
AD1
D
399 409Right-handed alpha
Helix 29
AD2
D
414 433Right-handed alpha
Helix 30
AD3
D
437 456Right-handed alpha
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There are no sheets in PDB entry 9M0F
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il