Analysis of interatomic Contacts of Structural Units in PDB entry:
9M0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M0H entry

There are 2 chains in PDB entry 9M0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 66LEU 283
B
 ALA 65SER 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9M0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
122 126Right-handed 310
Helix 2
AA2
A
128 133Right-handed alpha
Helix 3
AA3
A
144 148Right-handed 310
Helix 4
AA4
A
151 158Right-handed alpha
Helix 5
AA5
A
159 162Right-handed 310
Helix 6
AA6
A
168 174Right-handed alpha
Helix 7
AA7
A
174 186Right-handed alpha
Helix 8
AA8
A
187 189Right-handed 310
Helix 9
AA9
A
259 264Right-handed 310
Helix 10
AB1
A
266 275Right-handed alpha
Helix 11
AB2
A
278 283Right-handed alpha
Helix 12
AB3
B
122 126Right-handed 310
Helix 13
AB4
B
128 133Right-handed alpha
Helix 14
AB5
B
144 148Right-handed 310
Helix 15
AB6
B
151 158Right-handed alpha
Helix 16
AB7
B
159 162Right-handed 310
Helix 17
AB8
B
168 174Right-handed alpha
Helix 18
AB9
B
174 186Right-handed alpha
Helix 19
AC1
B
187 189Right-handed 310
Helix 20
AC2
B
238 240Right-handed 310
Helix 21
AC3
B
259 264Right-handed 310
Helix 22
AC4
B
266 275Right-handed alpha
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There are 6 sheets in PDB entry 9M0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
82 86anti-parallel
Strand 3
A
91 99anti-parallel
Strand 4
A
192 200anti-parallel
Strand 5
A
228 237anti-parallel
Strand 6
A
241 250anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
164 167anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
211 218anti-parallel
Strand 3
B
211 218anti-parallel
Strand 4
B
204 205anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
211 218anti-parallel
Strand 3
B
211 218anti-parallel
Strand 4
B
223 224anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 77first strand
Strand 2
B
82 86anti-parallel
Strand 3
B
91 99anti-parallel
Strand 4
B
192 200anti-parallel
Strand 5
B
228 236anti-parallel
Strand 6
B
242 250anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 141first strand
Strand 2
B
164 167anti-parallel
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