Analysis of interatomic Contacts of Structural Units in PDB entry:
9M0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M0M entry

There is 1 chain in PDB entry 9M0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 2LEU 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9M0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 35Right-handed alpha
Helix 2
AA2
A
54 64Right-handed alpha
Helix 3
AA3
A
94 98Right-handed 310
Helix 4
AA4
A
127 139Right-handed alpha
Helix 5
AA5
A
144 159Right-handed alpha
Helix 6
AA6
A
168 183Right-handed alpha
Helix 7
AA7
A
186 196Right-handed alpha
Helix 8
AA8
A
205 212Right-handed alpha
Helix 9
AA9
A
233 239Right-handed 310
Helix 10
AB1
A
240 256Right-handed alpha
Helix 11
AB2
A
281 289Right-handed alpha
Helix 12
AB3
A
304 309Right-handed alpha
Helix 13
AB4
A
309 319Right-handed alpha
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There are 2 sheets in PDB entry 9M0M. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
45 49parallel
Strand 3
A
5 8parallel
Strand 4
A
79 83parallel
Strand 5
A
99 105parallel
Strand 6
A
119 122parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 219first strand
Strand 2
A
222 231anti-parallel
Strand 3
A
259 266parallel
Strand 4
A
271 278anti-parallel
Strand 5
A
296 300anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il