Analysis of interatomic Contacts of Structural Units in PDB entry:
9M0T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M0T entry

There is 1 chain in PDB entry 9M0T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9M0T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 23Right-handed alpha
Helix 2
AA2
A
34 43Right-handed alpha
Helix 3
AA3
A
59 65Right-handed alpha
Helix 4
AA4
A
83 90Right-handed alpha
Helix 5
AA5
A
101 118Right-handed alpha
Helix 6
AA6
A
119 129Right-handed alpha
Helix 7
AA7
A
136 141Right-handed 310
Helix 8
AA8
A
156 171Right-handed alpha
Helix 9
AA9
A
182 190Right-handed alpha
Helix 10
AB1
A
195 203Right-handed alpha
Helix 11
AB2
A
221 228Right-handed alpha
Helix 12
AB3
A
239 243Right-handed 310
Helix 13
AB4
A
244 255Right-handed alpha
Helix 14
AB5
A
274 279Right-handed 310
Helix 15
AB6
A
292 312Right-handed alpha
Helix 16
AB7
A
320 324Right-handed 310
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There are 2 sheets in PDB entry 9M0T. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 27first strand
Strand 2
A
4 7parallel
Strand 3
A
45 49parallel
Strand 4
A
71 73parallel
Strand 5
A
93 95parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
173 177parallel
Strand 3
A
149 153parallel
Strand 4
A
205 208parallel
Strand 5
A
233 236parallel
Strand 6
A
259 262parallel
Strand 7
A
282 284parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il