Analysis of interatomic Contacts of Structural Units in PDB entry:
9M2I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M2I entry

There are 2 chains in PDB entry 9M2I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LYS 440
B
 ASP 2LYS 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9M2I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
33 37Right-handed 310
Helix 3
AA3
A
43 53Right-handed alpha
Helix 4
AA4
A
56 61Right-handed alpha
Helix 5
AA5
A
87 101Right-handed alpha
Helix 6
AA6
A
117 126Right-handed alpha
Helix 7
AA7
A
127 130Right-handed 310
Helix 8
AA8
A
141 154Right-handed alpha
Helix 9
AA9
A
163 168Right-handed alpha
Helix 10
AB1
A
168 181Right-handed alpha
Helix 11
AB2
A
201 209Right-handed alpha
Helix 12
AB3
A
212 214Right-handed 310
Helix 13
AB4
A
270 277Right-handed alpha
Helix 14
AB5
A
294 302Right-handed alpha
Helix 15
AB6
A
323 334Right-handed alpha
Helix 16
AB7
A
340 345Right-handed alpha
Helix 17
AB8
A
350 356Right-handed alpha
Helix 18
AB9
A
387 404Right-handed alpha
Helix 19
AC1
A
412 426Right-handed alpha
Helix 20
AC2
A
430 440Right-handed alpha
Helix 21
AC3
B
3 11Right-handed alpha
Helix 22
AC4
B
43 53Right-handed alpha
Helix 23
AC5
B
56 61Right-handed alpha
Helix 24
AC6
B
62 64Right-handed 310
Helix 25
AC7
B
87 101Right-handed alpha
Helix 26
AC8
B
115 126Right-handed alpha
Helix 27
AC9
B
127 130Right-handed 310
Helix 28
AD1
B
141 154Right-handed alpha
Helix 29
AD2
B
160 165Right-handed alpha
Helix 30
AD3
B
165 181Right-handed alpha
Helix 31
AD4
B
184 188Right-handed 310
Helix 32
AD5
B
197 210Right-handed alpha
Helix 33
AD6
B
250 255Right-handed alpha
Helix 34
AD7
B
270 276Right-handed alpha
Helix 35
AD8
B
294 302Right-handed alpha
Helix 36
AD9
B
319 322Right-handed 310
Helix 37
AE1
B
323 334Right-handed alpha
Helix 38
AE2
B
340 354Right-handed alpha
Helix 39
AE3
B
388 402Right-handed alpha
Helix 40
AE4
B
412 426Right-handed alpha
Helix 41
AE5
B
430 440Right-handed alpha
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There are 7 sheets in PDB entry 9M2I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 25first strand
Strand 2
B
21 24anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
105 107parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
190 193parallel
Strand 3
A
260 262parallel
Strand 4
A
283 285parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
242 243parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
105 107parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 193first strand
Strand 2
B
216 220parallel
Strand 3
B
223 224anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 285first strand
Strand 2
B
308 309parallel
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