Analysis of interatomic Contacts of Structural Units in PDB entry:
9M30


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M30 entry

There are 2 chains in PDB entry 9M30 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4GLU 875
B
 C -30 C 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9M30. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 15Right-handed alpha
Helix 2
AA2
A
96 105Right-handed alpha
Helix 3
AA3
A
113 123Right-handed alpha
Helix 4
AA4
A
125 143Right-handed alpha
Helix 5
AA5
A
166 173Right-handed alpha
Helix 6
AA6
A
174 185Right-handed alpha
Helix 7
AA7
A
186 191Right-handed 310
Helix 8
AA8
A
203 222Right-handed alpha
Helix 9
AA9
A
249 267Right-handed alpha
Helix 10
AB1
A
268 273Right-handed alpha
Helix 11
AB2
A
273 284Right-handed alpha
Helix 12
AB3
A
288 301Right-handed alpha
Helix 13
AB4
A
311 320Right-handed alpha
Helix 14
AB5
A
337 353Right-handed alpha
Helix 15
AB6
A
355 368Right-handed alpha
Helix 16
AB7
A
371 399Right-handed alpha
Helix 17
AB8
A
402 412Right-handed alpha
Helix 18
AB9
A
431 442Right-handed alpha
Helix 19
AC1
A
445 473Right-handed alpha
Helix 20
AC2
A
480 485Right-handed alpha
Helix 21
AC3
A
488 506Right-handed alpha
Helix 22
AC4
A
516 527Right-handed alpha
Helix 23
AC5
A
533 545Right-handed alpha
Helix 24
AC6
A
558 568Right-handed alpha
Helix 25
AC7
A
571 581Right-handed alpha
Helix 26
AC8
A
585 591Right-handed 310
Helix 27
AC9
A
592 603Right-handed alpha
Helix 28
AD1
A
604 615Right-handed alpha
Helix 29
AD2
A
625 639Right-handed alpha
Helix 30
AD3
A
641 647Right-handed 310
Helix 31
AD4
A
663 712Right-handed alpha
Helix 32
AD5
A
725 731Right-handed alpha
Helix 33
AD6
A
732 734Right-handed 310
Helix 34
AD7
A
751 761Right-handed alpha
Helix 35
AD8
A
764 778Right-handed alpha
Helix 36
AD9
A
778 783Right-handed alpha
Helix 37
AE1
A
796 813Right-handed alpha
Helix 38
AE2
A
822 834Right-handed alpha
Helix 39
AE3
A
845 849Right-handed 310
Helix 40
AE4
A
851 860Right-handed alpha
Helix 41
AE5
A
860 865Right-handed alpha
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There are 4 sheets in PDB entry 9M30. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 22first strand
Strand 2
A
25 31anti-parallel
Strand 3
A
37 43anti-parallel
Strand 4
A
51 52anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
67 71anti-parallel
Strand 3
A
78 81anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
200 201anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 718first strand
Strand 2
A
721 722anti-parallel
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