Analysis of interatomic Contacts of Structural Units in PDB entry:
9M31


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M31 entry

There are 2 chains in PDB entry 9M31 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5PHE 956
B
 A -30 C 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9M31. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 13Right-handed alpha
Helix 2
AA2
A
61 63Right-handed 310
Helix 3
AA3
A
99 109Right-handed alpha
Helix 4
AA4
A
118 149Right-handed alpha
Helix 5
AA5
A
165 171Right-handed alpha
Helix 6
AA6
A
172 180Right-handed 310
Helix 7
AA7
A
182 201Right-handed alpha
Helix 8
AA8
A
202 207Right-handed 310
Helix 9
AA9
A
208 212Right-handed alpha
Helix 10
AB1
A
224 243Right-handed alpha
Helix 11
AB2
A
265 286Right-handed alpha
Helix 12
AB3
A
286 291Right-handed alpha
Helix 13
AB4
A
291 303Right-handed alpha
Helix 14
AB5
A
305 308Right-handed 310
Helix 15
AB6
A
309 318Right-handed alpha
Helix 16
AB7
A
328 338Right-handed alpha
Helix 17
AB8
A
343 348Right-handed alpha
Helix 18
AB9
A
348 353Right-handed alpha
Helix 19
AC1
A
355 382Right-handed alpha
Helix 20
AC2
A
393 404Right-handed alpha
Helix 21
AC3
A
407 424Right-handed alpha
Helix 22
AC4
A
426 434Right-handed alpha
Helix 23
AC5
A
438 446Right-handed 310
Helix 24
AC6
A
463 474Right-handed alpha
Helix 25
AC7
A
477 505Right-handed alpha
Helix 26
AC8
A
512 519Right-handed 310
Helix 27
AC9
A
520 535Right-handed alpha
Helix 28
AD1
A
545 556Right-handed alpha
Helix 29
AD2
A
561 573Right-handed alpha
Helix 30
AD3
A
587 596Right-handed alpha
Helix 31
AD4
A
599 608Right-handed alpha
Helix 32
AD5
A
610 619Right-handed alpha
Helix 33
AD6
A
621 633Right-handed alpha
Helix 34
AD7
A
641 654Right-handed alpha
Helix 35
AD8
A
661 675Right-handed alpha
Helix 36
AD9
A
678 683Right-handed alpha
Helix 37
AE1
A
684 689Right-handed alpha
Helix 38
AE2
A
695 744Right-handed alpha
Helix 39
AE3
A
758 766Right-handed alpha
Helix 40
AE4
A
774 792Right-handed alpha
Helix 41
AE5
A
797 805Right-handed alpha
Helix 42
AE6
A
808 826Right-handed alpha
Helix 43
AE7
A
835 848Right-handed alpha
Helix 44
AE8
A
850 864Right-handed alpha
Helix 45
AE9
A
869 874Right-handed alpha
Helix 46
AF1
A
882 899Right-handed alpha
Helix 47
AF2
A
905 918Right-handed alpha
Helix 48
AF3
A
921 929Right-handed alpha
Helix 49
AF4
A
930 933Right-handed 310
Helix 50
AF5
A
935 942Right-handed alpha
Helix 51
AF6
A
944 948Right-handed 310
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There are 3 sheets in PDB entry 9M31. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 20first strand
Strand 2
A
23 29anti-parallel
Strand 3
A
35 42anti-parallel
Strand 4
A
45 48anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
65 69anti-parallel
Strand 3
A
82 84anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 215first strand
Strand 2
A
220 222anti-parallel
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