Analysis of interatomic Contacts of Structural Units in PDB entry:
9M34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M34 entry

There are 3 chains in PDB entry 9M34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 89GLU 875
B
 C -30 A 19
C
 U 12 C 30
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9M34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 105Right-handed alpha
Helix 2
AA2
A
113 143Right-handed alpha
Helix 3
AA3
A
165 173Right-handed alpha
Helix 4
AA4
A
174 185Right-handed alpha
Helix 5
AA5
A
186 191Right-handed 310
Helix 6
AA6
A
203 222Right-handed alpha
Helix 7
AA7
A
247 273Right-handed alpha
Helix 8
AA8
A
275 284Right-handed alpha
Helix 9
AA9
A
288 298Right-handed alpha
Helix 10
AB1
A
311 321Right-handed alpha
Helix 11
AB2
A
322 329Right-handed 310
Helix 12
AB3
A
330 336Right-handed 310
Helix 13
AB4
A
337 356Right-handed alpha
Helix 14
AB5
A
356 368Right-handed alpha
Helix 15
AB6
A
371 399Right-handed alpha
Helix 16
AB7
A
402 412Right-handed alpha
Helix 17
AB8
A
431 442Right-handed alpha
Helix 18
AB9
A
445 473Right-handed alpha
Helix 19
AC1
A
480 485Right-handed alpha
Helix 20
AC2
A
488 504Right-handed alpha
Helix 21
AC3
A
515 527Right-handed alpha
Helix 22
AC4
A
533 545Right-handed alpha
Helix 23
AC5
A
559 568Right-handed alpha
Helix 24
AC6
A
571 581Right-handed alpha
Helix 25
AC7
A
582 590Right-handed 310
Helix 26
AC8
A
592 603Right-handed alpha
Helix 27
AC9
A
604 615Right-handed alpha
Helix 28
AD1
A
625 639Right-handed alpha
Helix 29
AD2
A
642 648Right-handed 310
Helix 30
AD3
A
663 712Right-handed alpha
Helix 31
AD4
A
725 733Right-handed alpha
Helix 32
AD5
A
734 740Right-handed alpha
Helix 33
AD6
A
751 761Right-handed alpha
Helix 34
AD7
A
764 778Right-handed alpha
Helix 35
AD8
A
778 783Right-handed alpha
Helix 36
AD9
A
796 813Right-handed alpha
Helix 37
AE1
A
822 834Right-handed alpha
Helix 38
AE2
A
837 844Right-handed alpha
Helix 39
AE3
A
845 849Right-handed 310
Helix 40
AE4
A
851 860Right-handed alpha
Helix 41
AE5
A
860 865Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9M34.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
200 201anti-parallel
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