Analysis of interatomic Contacts of Structural Units in PDB entry:
9M37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M37 entry

There are 2 chains in PDB entry 9M37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 350
B
 MET 1MET 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9M37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
35 40Right-handed alpha
Helix 3
AA3
A
51 56Right-handed alpha
Helix 4
AA4
A
68 70Right-handed 310
Helix 5
AA5
A
71 82Right-handed alpha
Helix 6
AA6
A
95 110Right-handed alpha
Helix 7
AA7
A
117 121Right-handed 310
Helix 8
AA8
A
122 135Right-handed alpha
Helix 9
AA9
A
155 164Right-handed 310
Helix 10
AB1
A
166 171Right-handed alpha
Helix 11
AB2
A
171 184Right-handed alpha
Helix 12
AB3
A
305 316Right-handed alpha
Helix 13
AB4
A
324 345Right-handed alpha
Helix 14
AB5
B
10 21Right-handed alpha
Helix 15
AB6
B
35 40Right-handed alpha
Helix 16
AB7
B
51 56Right-handed alpha
Helix 17
AB8
B
68 70Right-handed 310
Helix 18
AB9
B
71 82Right-handed alpha
Helix 19
AC1
B
97 110Right-handed alpha
Helix 20
AC2
B
117 121Right-handed 310
Helix 21
AC3
B
122 135Right-handed alpha
Helix 22
AC4
B
155 164Right-handed 310
Helix 23
AC5
B
166 171Right-handed alpha
Helix 24
AC6
B
171 184Right-handed alpha
Helix 25
AC7
B
305 314Right-handed alpha
Helix 26
AC8
B
324 345Right-handed alpha
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There are 4 sheets in PDB entry 9M37. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
26 32parallel
Strand 3
A
2 7parallel
Strand 4
A
62 65parallel
Strand 5
A
85 89parallel
Strand 6
A
113 116parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 296first strand
Strand 2
A
256 262anti-parallel
Strand 3
A
246 251anti-parallel
Strand 4
A
237 243anti-parallel
Strand 5
A
140 148anti-parallel
Strand 6
A
218 224parallel
Strand 7
A
206 213anti-parallel
Strand 8
A
188 196anti-parallel
Strand 9
A
348 349anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
26 32parallel
Strand 3
B
2 7parallel
Strand 4
B
62 65parallel
Strand 5
B
85 89parallel
Strand 6
B
113 116parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
292 296first strand
Strand 2
B
256 262anti-parallel
Strand 3
B
246 251anti-parallel
Strand 4
B
237 243anti-parallel
Strand 5
B
140 148anti-parallel
Strand 6
B
218 224parallel
Strand 7
B
206 213anti-parallel
Strand 8
B
188 196anti-parallel
Strand 9
B
348 349anti-parallel
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