Analysis of interatomic Contacts of Structural Units in PDB entry:
9M38


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M38 entry

There is 1 chain in PDB entry 9M38 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 92ARG 866
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 9M38. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 105Right-handed alpha
Helix 2
AA2
A
113 143Right-handed alpha
Helix 3
AA3
A
165 172Right-handed alpha
Helix 4
AA4
A
173 184Right-handed alpha
Helix 5
AA5
A
185 190Right-handed 310
Helix 6
AA6
A
203 222Right-handed alpha
Helix 7
AA7
A
250 270Right-handed alpha
Helix 8
AA8
A
275 284Right-handed alpha
Helix 9
AA9
A
288 301Right-handed alpha
Helix 10
AB1
A
311 321Right-handed alpha
Helix 11
AB2
A
330 336Right-handed 310
Helix 12
AB3
A
337 356Right-handed alpha
Helix 13
AB4
A
357 368Right-handed alpha
Helix 14
AB5
A
371 399Right-handed alpha
Helix 15
AB6
A
402 412Right-handed alpha
Helix 16
AB7
A
431 442Right-handed alpha
Helix 17
AB8
A
445 473Right-handed alpha
Helix 18
AB9
A
480 485Right-handed alpha
Helix 19
AC1
A
488 504Right-handed alpha
Helix 20
AC2
A
515 527Right-handed alpha
Helix 21
AC3
A
533 545Right-handed alpha
Helix 22
AC4
A
559 568Right-handed alpha
Helix 23
AC5
A
571 581Right-handed alpha
Helix 24
AC6
A
582 591Right-handed 310
Helix 25
AC7
A
592 603Right-handed alpha
Helix 26
AC8
A
604 615Right-handed alpha
Helix 27
AC9
A
625 639Right-handed alpha
Helix 28
AD1
A
643 648Right-handed 310
Helix 29
AD2
A
663 711Right-handed alpha
Helix 30
AD3
A
725 733Right-handed alpha
Helix 31
AD4
A
752 761Right-handed alpha
Helix 32
AD5
A
764 778Right-handed alpha
Helix 33
AD6
A
778 783Right-handed alpha
Helix 34
AD7
A
787 791Right-handed 310
Helix 35
AD8
A
796 813Right-handed alpha
Helix 36
AD9
A
822 834Right-handed alpha
Helix 37
AE1
A
837 845Right-handed alpha
Helix 38
AE2
A
846 849Right-handed 310
Helix 39
AE3
A
851 860Right-handed alpha
Helix 40
AE4
A
860 866Right-handed alpha
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There are 2 sheets in PDB entry 9M38. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
200 201anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 718first strand
Strand 2
A
721 722anti-parallel
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