Analysis of interatomic Contacts of Structural Units in PDB entry:
9M3X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M3X entry

There are 6 chains in PDB entry 9M3X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 25GLU 775
B
LYS 25GLU 775
C
LYS 25GLU 775
D
LYS 25GLU 775
E
LYS 25GLU 775
F
LYS 25GLU 775
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are199 helices in PDB entry 9M3X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
46 54Right-handed alpha
Helix 2
AA2
A
89 97Right-handed alpha
Helix 3
AA3
A
133 145Right-handed alpha
Helix 4
AA4
A
205 209Right-handed 310
Helix 5
AA5
A
213 229Right-handed alpha
Helix 6
AA6
A
229 237Right-handed alpha
Helix 7
AA7
A
254 266Right-handed alpha
Helix 8
AA8
A
274 280Right-handed alpha
Helix 9
AA9
A
283 299Right-handed alpha
Helix 10
AB1
A
308 313Right-handed alpha
Helix 11
AB2
A
321 338Right-handed alpha
Helix 12
AB3
A
352 356Right-handed 310
Helix 13
AB4
A
357 362Right-handed 310
Helix 14
AB5
A
376 388Right-handed alpha
Helix 15
AB6
A
398 405Right-handed alpha
Helix 16
AB7
A
410 431Right-handed alpha
Helix 17
AB8
A
441 448Right-handed alpha
Helix 18
AB9
A
451 462Right-handed alpha
Helix 19
AC1
A
478 482Right-handed 310
Helix 20
AC2
A
485 496Right-handed alpha
Helix 21
AC3
A
496 502Right-handed alpha
Helix 22
AC4
A
502 510Right-handed alpha
Helix 23
AC5
A
526 539Right-handed alpha
Helix 24
AC6
A
547 552Right-handed alpha
Helix 25
AC7
A
559 572Right-handed alpha
Helix 26
AC8
A
598 615Right-handed alpha
Helix 27
AC9
A
629 633Right-handed 310
Helix 28
AD1
A
634 639Right-handed 310
Helix 29
AD2
A
653 666Right-handed alpha
Helix 30
AD3
A
675 681Right-handed alpha
Helix 31
AD4
A
687 720Right-handed alpha
Helix 32
AD5
A
736 747Right-handed alpha
Helix 33
AD6
A
752 763Right-handed alpha
Helix 34
AD7
B
46 54Right-handed alpha
Helix 35
AD8
B
89 97Right-handed alpha
Helix 36
AD9
B
133 145Right-handed alpha
Helix 37
AE1
B
205 209Right-handed 310
Helix 38
AE2
B
213 229Right-handed alpha
Helix 39
AE3
B
229 237Right-handed alpha
Helix 40
AE4
B
254 266Right-handed alpha
Helix 41
AE5
B
274 280Right-handed alpha
Helix 42
AE6
B
283 299Right-handed alpha
Helix 43
AE7
B
308 313Right-handed alpha
Helix 44
AE8
B
321 338Right-handed alpha
Helix 45
AE9
B
352 356Right-handed 310
Helix 46
AF1
B
357 362Right-handed 310
Helix 47
AF2
B
376 388Right-handed alpha
Helix 48
AF3
B
398 405Right-handed alpha
Helix 49
AF4
B
410 431Right-handed alpha
Helix 50
AF5
B
441 448Right-handed alpha
Helix 51
AF6
B
451 462Right-handed alpha
Helix 52
AF7
B
478 482Right-handed 310
Helix 53
AF8
B
485 496Right-handed alpha
Helix 54
AF9
B
496 502Right-handed alpha
Helix 55
AG1
B
502 510Right-handed alpha
Helix 56
AG2
B
526 539Right-handed alpha
Helix 57
AG3
B
547 552Right-handed alpha
Helix 58
AG4
B
559 572Right-handed alpha
Helix 59
AG5
B
598 615Right-handed alpha
Helix 60
AG6
B
629 633Right-handed 310
Helix 61
AG7
B
634 639Right-handed 310
Helix 62
AG8
B
653 666Right-handed alpha
Helix 63
AG9
B
675 681Right-handed alpha
Helix 64
AH1
B
687 720Right-handed alpha
Helix 65
AH2
B
736 747Right-handed alpha
Helix 66
AH3
B
752 763Right-handed alpha
Helix 67
AH4
C
46 54Right-handed alpha
Helix 68
AH5
C
89 97Right-handed alpha
Helix 69
AH6
C
133 145Right-handed alpha
Helix 70
AH7
C
205 209Right-handed 310
Helix 71
AH8
C
213 229Right-handed alpha
Helix 72
AH9
C
229 237Right-handed alpha
Helix 73
AI1
C
254 266Right-handed alpha
Helix 74
AI2
C
274 280Right-handed alpha
Helix 75
AI3
C
283 299Right-handed alpha
Helix 76
AI4
C
308 313Right-handed alpha
Helix 77
AI5
C
321 338Right-handed alpha
Helix 78
AI6
C
352 356Right-handed 310
Helix 79
AI7
C
357 362Right-handed 310
Helix 80
AI8
C
376 388Right-handed alpha
Helix 81
AI9
C
398 405Right-handed alpha
Helix 82
AJ1
C
410 431Right-handed alpha
Helix 83
AJ2
C
441 448Right-handed alpha
Helix 84
AJ3
C
451 462Right-handed alpha
Helix 85
AJ4
C
478 482Right-handed 310
Helix 86
AJ5
C
485 496Right-handed alpha
Helix 87
AJ6
C
496 502Right-handed alpha
Helix 88
AJ7
C
502 510Right-handed alpha
Helix 89
AJ8
C
526 539Right-handed alpha
Helix 90
AJ9
C
547 552Right-handed alpha
Helix 91
AK1
C
559 572Right-handed alpha
Helix 92
AK2
C
598 615Right-handed alpha
Helix 93
AK3
C
629 633Right-handed 310
Helix 94
AK4
C
634 639Right-handed 310
Helix 95
AK5
C
653 666Right-handed alpha
Helix 96
AK6
C
675 681Right-handed alpha
Helix 97
AK7
C
687 720Right-handed alpha
Helix 98
AK8
C
736 747Right-handed alpha
Helix 99
AK9
C
752 763Right-handed alpha
Helix 100
AL1
D
46 54Right-handed alpha
Helix 101
AL2
D
89 97Right-handed alpha
Helix 102
AL3
D
133 145Right-handed alpha
Helix 103
AL4
D
205 209Right-handed 310
Helix 104
AL5
D
213 229Right-handed alpha
Helix 105
AL6
D
229 237Right-handed alpha
Helix 106
AL7
D
254 266Right-handed alpha
Helix 107
AL8
D
274 280Right-handed alpha
Helix 108
AL9
D
283 299Right-handed alpha
Helix 109
AM1
D
308 313Right-handed alpha
Helix 110
AM2
D
321 338Right-handed alpha
Helix 111
AM3
D
352 356Right-handed 310
Helix 112
AM4
D
357 362Right-handed 310
Helix 113
AM5
D
376 388Right-handed alpha
Helix 114
AM6
D
398 405Right-handed alpha
Helix 115
AM7
D
410 431Right-handed alpha
Helix 116
AM8
D
441 448Right-handed alpha
Helix 117
AM9
D
451 462Right-handed alpha
Helix 118
AN1
D
478 482Right-handed 310
Helix 119
AN2
D
485 496Right-handed alpha
Helix 120
AN3
D
496 502Right-handed alpha
Helix 121
AN4
D
502 510Right-handed alpha
Helix 122
AN5
D
526 539Right-handed alpha
Helix 123
AN6
D
547 552Right-handed alpha
Helix 124
AN7
D
559 572Right-handed alpha
Helix 125
AN8
D
598 615Right-handed alpha
Helix 126
AN9
D
629 633Right-handed 310
Helix 127
AO1
D
634 639Right-handed 310
Helix 128
AO2
D
653 666Right-handed alpha
Helix 129
AO3
D
675 681Right-handed alpha
Helix 130
AO4
D
687 720Right-handed alpha
Helix 131
AO5
D
736 747Right-handed alpha
Helix 132
AO6
D
752 763Right-handed alpha
Helix 133
AO7
E
46 54Right-handed alpha
Helix 134
AO8
E
89 97Right-handed alpha
Helix 135
AO9
E
133 145Right-handed alpha
Helix 136
AP1
E
205 209Right-handed 310
Helix 137
AP2
E
213 229Right-handed alpha
Helix 138
AP3
E
229 237Right-handed alpha
Helix 139
AP4
E
254 266Right-handed alpha
Helix 140
AP5
E
274 280Right-handed alpha
Helix 141
AP6
E
283 299Right-handed alpha
Helix 142
AP7
E
308 313Right-handed alpha
Helix 143
AP8
E
321 338Right-handed alpha
Helix 144
AP9
E
352 356Right-handed 310
Helix 145
AQ1
E
357 362Right-handed 310
Helix 146
AQ2
E
376 388Right-handed alpha
Helix 147
AQ3
E
398 405Right-handed alpha
Helix 148
AQ4
E
410 431Right-handed alpha
Helix 149
AQ5
E
441 448Right-handed alpha
Helix 150
AQ6
E
451 462Right-handed alpha
Helix 151
AQ7
E
478 482Right-handed 310
Helix 152
AQ8
E
485 496Right-handed alpha
Helix 153
AQ9
E
496 502Right-handed alpha
Helix 154
AR1
E
502 510Right-handed alpha
Helix 155
AR2
E
526 539Right-handed alpha
Helix 156
AR3
E
547 552Right-handed alpha
Helix 157
AR4
E
559 572Right-handed alpha
Helix 158
AR5
E
598 615Right-handed alpha
Helix 159
AR6
E
629 633Right-handed 310
Helix 160
AR7
E
634 639Right-handed 310
Helix 161
AR8
E
653 666Right-handed alpha
Helix 162
AR9
E
675 681Right-handed alpha
Helix 163
AS1
E
687 720Right-handed alpha
Helix 164
AS2
E
736 747Right-handed alpha
Helix 165
AS3
E
752 763Right-handed alpha
Helix 166
AS4
F
46 54Right-handed alpha
Helix 167
AS5
F
89 97Right-handed alpha
Helix 168
AS6
F
133 145Right-handed alpha
Helix 169
AS7
F
205 209Right-handed 310
Helix 170
AS8
F
213 229Right-handed alpha
Helix 171
AS9
F
229 237Right-handed alpha
Helix 172
AT1
F
254 266Right-handed alpha
Helix 173
AT2
F
274 280Right-handed alpha
Helix 174
AT3
F
283 299Right-handed alpha
Helix 175
AT4
F
308 313Right-handed alpha
Helix 176
AT5
F
321 338Right-handed alpha
Helix 177
AT6
F
352 356Right-handed 310
Helix 178
AT7
F
357 362Right-handed 310
Helix 179
AT8
F
376 388Right-handed alpha
Helix 180
AT9
F
398 405Right-handed alpha
Helix 181
AU1
F
410 431Right-handed alpha
Helix 182
AU2
F
441 448Right-handed alpha
Helix 183
AU3
F
451 462Right-handed alpha
Helix 184
AU4
F
478 482Right-handed 310
Helix 185
AU5
F
485 496Right-handed alpha
Helix 186
AU6
F
496 502Right-handed alpha
Helix 187
AU7
F
502 510Right-handed alpha
Helix 188
AU8
F
526 539Right-handed alpha
Helix 189
AU9
F
547 552Right-handed alpha
Helix 190
AV1
F
553 558Right-handed 310
Helix 191
AV2
F
559 572Right-handed alpha
Helix 192
AV3
F
598 615Right-handed alpha
Helix 193
AV4
F
629 633Right-handed 310
Helix 194
AV5
F
634 639Right-handed 310
Helix 195
AV6
F
653 666Right-handed alpha
Helix 196
AV7
F
675 681Right-handed alpha
Helix 197
AV8
F
687 720Right-handed alpha
Helix 198
AV9
F
736 747Right-handed alpha
Helix 199
AW1
F
752 763Right-handed alpha
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There are 30 sheets in PDB entry 9M3X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
29 33first strand
Strand 2
A
85 87parallel
Strand 3
A
42 45anti-parallel
Strand 4
A
70 77parallel
Strand 5
A
60 64anti-parallel
Strand 6
A
103 108anti-parallel
Strand 7
A
29 33anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
155 160first strand
Strand 2
A
163 172anti-parallel
Strand 3
A
117 122anti-parallel
Strand 4
A
185 187parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
149 151first strand
Strand 2
A
177 179anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
268 273first strand
Strand 2
A
302 307parallel
Strand 3
A
344 350parallel
Strand 4
A
243 247parallel
Strand 5
A
368 371parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
541 546first strand
Strand 2
A
575 580parallel
Strand 3
A
621 627parallel
Strand 4
A
516 520parallel
Strand 5
A
645 648parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
29 33first strand
Strand 2
B
85 87parallel
Strand 3
B
42 45anti-parallel
Strand 4
B
70 77parallel
Strand 5
B
60 64anti-parallel
Strand 6
B
103 108anti-parallel
Strand 7
B
29 33anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
155 160first strand
Strand 2
B
163 172anti-parallel
Strand 3
B
117 122anti-parallel
Strand 4
B
185 187parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
149 151first strand
Strand 2
B
177 179anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
268 273first strand
Strand 2
B
302 307parallel
Strand 3
B
344 350parallel
Strand 4
B
243 247parallel
Strand 5
B
368 371parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
541 546first strand
Strand 2
B
575 580parallel
Strand 3
B
621 627parallel
Strand 4
B
516 520parallel
Strand 5
B
645 648parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
29 33first strand
Strand 2
C
85 87parallel
Strand 3
C
42 45anti-parallel
Strand 4
C
70 77parallel
Strand 5
C
60 64anti-parallel
Strand 6
C
103 108anti-parallel
Strand 7
C
29 33anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
155 160first strand
Strand 2
C
163 172anti-parallel
Strand 3
C
117 122anti-parallel
Strand 4
C
185 187parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
149 151first strand
Strand 2
C
177 179anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
268 273first strand
Strand 2
C
302 307parallel
Strand 3
C
344 350parallel
Strand 4
C
243 247parallel
Strand 5
C
368 371parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
541 546first strand
Strand 2
C
575 580parallel
Strand 3
C
621 627parallel
Strand 4
C
516 520parallel
Strand 5
C
645 648parallel
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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
29 33first strand
Strand 2
D
85 87parallel
Strand 3
D
42 45anti-parallel
Strand 4
D
70 77parallel
Strand 5
D
60 64anti-parallel
Strand 6
D
103 108anti-parallel
Strand 7
D
29 33anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
155 160first strand
Strand 2
D
163 172anti-parallel
Strand 3
D
117 122anti-parallel
Strand 4
D
185 187parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
149 151first strand
Strand 2
D
177 179anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
268 273first strand
Strand 2
D
302 307parallel
Strand 3
D
344 350parallel
Strand 4
D
243 247parallel
Strand 5
D
368 371parallel
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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
541 546first strand
Strand 2
D
575 580parallel
Strand 3
D
621 627parallel
Strand 4
D
516 520parallel
Strand 5
D
645 648parallel
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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
29 33first strand
Strand 2
E
85 87parallel
Strand 3
E
42 45anti-parallel
Strand 4
E
70 77parallel
Strand 5
E
60 64anti-parallel
Strand 6
E
103 108anti-parallel
Strand 7
E
29 33anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
155 160first strand
Strand 2
E
163 172anti-parallel
Strand 3
E
117 122anti-parallel
Strand 4
E
185 187parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
149 151first strand
Strand 2
E
177 179anti-parallel
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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
268 273first strand
Strand 2
E
302 307parallel
Strand 3
E
344 350parallel
Strand 4
E
243 247parallel
Strand 5
E
368 371parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
541 546first strand
Strand 2
E
575 580parallel
Strand 3
E
621 627parallel
Strand 4
E
516 520parallel
Strand 5
E
645 648parallel
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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
29 33first strand
Strand 2
F
85 87parallel
Strand 3
F
42 45anti-parallel
Strand 4
F
70 77parallel
Strand 5
F
60 64anti-parallel
Strand 6
F
103 108anti-parallel
Strand 7
F
29 33anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
155 160first strand
Strand 2
F
163 172anti-parallel
Strand 3
F
117 122anti-parallel
Strand 4
F
185 187parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
149 151first strand
Strand 2
F
177 179anti-parallel
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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
268 273first strand
Strand 2
F
302 307parallel
Strand 3
F
344 350parallel
Strand 4
F
243 247parallel
Strand 5
F
368 371parallel
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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
541 546first strand
Strand 2
F
575 580parallel
Strand 3
F
621 627parallel
Strand 4
F
516 520parallel
Strand 5
F
645 648parallel
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