Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 9M46 entry
There are 4 chains in PDB entry 9M46
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
ASN 17 | ARG 69 |
B
|
PRO 16 | SER 65 |
C
|
ASN 17 | HIS 68 |
D
|
ASN 17 | GLN 66 |
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There are 4
helices in PDB entry 9M46. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 17 |
68 | Right-handed alpha |
| Helix 2 |
AA2 | B
| 17 |
65 | Right-handed alpha |
| Helix 3 |
AA3 | C
| 18 |
68 | Right-handed alpha |
| Helix 4 |
AA4 | D
| 18 |
66 | Right-handed alpha |
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There are no sheets in PDB entry
9M46
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il