Analysis of interatomic Contacts of Structural Units in PDB entry:
9M4N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M4N entry

There is 1 chain in PDB entry 9M4N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 26ARG 748
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9M4N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 53Right-handed alpha
Helix 2
AA2
A
89 96Right-handed alpha
Helix 3
AA3
A
133 138Right-handed alpha
Helix 4
AA4
A
138 144Right-handed alpha
Helix 5
AA5
A
205 209Right-handed 310
Helix 6
AA6
A
212 223Right-handed alpha
Helix 7
AA7
A
223 229Right-handed alpha
Helix 8
AA8
A
231 235Right-handed 310
Helix 9
AA9
A
254 266Right-handed alpha
Helix 10
AB1
A
274 278Right-handed alpha
Helix 11
AB2
A
283 299Right-handed alpha
Helix 12
AB3
A
308 313Right-handed alpha
Helix 13
AB4
A
323 328Right-handed alpha
Helix 14
AB5
A
328 337Right-handed alpha
Helix 15
AB6
A
376 388Right-handed alpha
Helix 16
AB7
A
398 405Right-handed alpha
Helix 17
AB8
A
410 428Right-handed alpha
Helix 18
AB9
A
451 461Right-handed alpha
Helix 19
AC1
A
529 539Right-handed alpha
Helix 20
AC2
A
546 551Right-handed alpha
Helix 21
AC3
A
560 572Right-handed alpha
Helix 22
AC4
A
581 586Right-handed 310
Helix 23
AC5
A
604 613Right-handed alpha
Helix 24
AC6
A
614 619Right-handed alpha
Helix 25
AC7
A
677 681Right-handed 310
Helix 26
AC8
A
690 701Right-handed alpha
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There are 5 sheets in PDB entry 9M4N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
70 77parallel
Strand 3
A
60 64anti-parallel
Strand 4
A
103 108anti-parallel
Strand 5
A
29 33anti-parallel
Strand 6
A
85 87parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 122first strand
Strand 2
A
163 169anti-parallel
Strand 3
A
154 160anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 273first strand
Strand 2
A
302 307parallel
Strand 3
A
344 350parallel
Strand 4
A
243 247parallel
Strand 5
A
368 371parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 393first strand
Strand 2
A
449 450parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 545first strand
Strand 2
A
575 579parallel
Strand 3
A
621 626parallel
Strand 4
A
516 520parallel
Strand 5
A
646 648parallel
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