Analysis of interatomic Contacts of Structural Units in PDB entry:
9M5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M5X entry

There is 1 chain in PDB entry 9M5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 346LYS 1527
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9M5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
350 355Right-handed alpha
Helix 2
AA2
A
407 411Right-handed 310
Helix 3
AA3
A
494 515Right-handed alpha
Helix 4
AA4
A
527 536Right-handed alpha
Helix 5
AA5
A
547 558Right-handed alpha
Helix 6
AA6
A
559 568Right-handed alpha
Helix 7
AA7
A
577 590Right-handed alpha
Helix 8
AA8
A
631 644Right-handed alpha
Helix 9
AA9
A
781 783Right-handed 310
Helix 10
AB1
A
785 789Right-handed 310
Helix 11
AB2
A
822 824Right-handed 310
Helix 12
AB3
A
825 846Right-handed alpha
Helix 13
AB4
A
880 892Right-handed alpha
Helix 14
AB5
A
976 981Right-handed alpha
Helix 15
AB6
A
981 987Right-handed alpha
Helix 16
AB7
A
1003 1005Right-handed 310
Helix 17
AB8
A
1103 1112Right-handed alpha
Helix 18
AB9
A
1124 1135Right-handed alpha
Helix 19
AC1
A
1144 1156Right-handed alpha
Helix 20
AC2
A
1165 1174Right-handed alpha
Helix 21
AC3
A
1176 1182Right-handed alpha
Helix 22
AC4
A
1211 1216Right-handed alpha
Helix 23
AC5
A
1218 1231Right-handed alpha
Helix 24
AC6
A
1242 1245Right-handed 310
Helix 25
AC7
A
1249 1263Right-handed alpha
Helix 26
AC8
A
1274 1277Right-handed 310
Helix 27
AC9
A
1337 1343Right-handed alpha
Helix 28
AD1
A
1365 1373Right-handed alpha
Helix 29
AD2
A
1387 1397Right-handed alpha
Helix 30
AD3
A
1404 1408Right-handed 310
Helix 31
AD4
A
1452 1456Right-handed 310
Helix 32
AD5
A
1477 1485Right-handed alpha
Helix 33
AD6
A
1496 1506Right-handed alpha
Helix 34
AD7
A
1509 1525Right-handed alpha
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There are 12 sheets in PDB entry 9M5X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 348first strand
Strand 2
A
593 594anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 457first strand
Strand 2
A
424 430anti-parallel
Strand 3
A
392 399anti-parallel
Strand 4
A
484 487parallel
Strand 5
A
475 479anti-parallel
Strand 6
A
463 467anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 630first strand
Strand 2
A
1162 1163anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
712 713first strand
Strand 2
A
729 732anti-parallel
Strand 3
A
735 738anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
718 719first strand
Strand 2
A
725 727anti-parallel
Strand 3
A
755 764anti-parallel
Strand 4
A
770 779anti-parallel
Strand 5
A
793 804anti-parallel
Strand 6
A
852 859parallel
Strand 7
A
814 816parallel
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There are 14 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
808 812first strand
Strand 2
A
742 745anti-parallel
Strand 3
A
755 764anti-parallel
Strand 4
A
770 779anti-parallel
Strand 5
A
793 804anti-parallel
Strand 6
A
852 859parallel
Strand 7
A
864 866anti-parallel
Strand 8
A
1265 1272anti-parallel
Strand 9
A
1283 1290anti-parallel
Strand 10
A
1234 1240anti-parallel
Strand 11
A
1191 1194parallel
Strand 12
A
1095 1098parallel
Strand 13
A
1119 1122parallel
Strand 14
A
1139 1142parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
896 897first strand
Strand 2
A
903 906anti-parallel
Strand 3
A
909 912anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
992 995first strand
Strand 2
A
1031 1039parallel
Strand 3
A
1007 1014parallel
Strand 4
A
916 919anti-parallel
Strand 5
A
947 955anti-parallel
Strand 6
A
968 973anti-parallel
Strand 7
A
999 1002anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
992 995first strand
Strand 2
A
1031 1039parallel
Strand 3
A
1044 1047anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1312 1314first strand
Strand 2
A
1320 1322anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1356 1357first strand
Strand 2
A
1378 1379anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1412 1414first strand
Strand 2
A
1420 1422anti-parallel
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