Analysis of interatomic Contacts of Structural Units in PDB entry:
9M67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9M67 entry

There are 10 chains in PDB entry 9M67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 20	PHE 440
B	ALA 46	ILE 454
C	THR 20	PHE 440
D	ALA 46	ILE 454
E	THR 20	PHE 440
F	ALA 46	ILE 454
G	THR 20	PHE 440
H	ALA 46	ILE 454
I	THR 20	PHE 440
J	ALA 46	ILE 454

There are 85 helices in PDB entry 9M67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	65	Right-handed alpha
Helix 2	AA2	A	66	70	Right-handed 310
Helix 3	AA3	A	152	164	Right-handed alpha
Helix 4	AA4	A	201	207	Right-handed alpha
Helix 5	AA5	A	269	294	Right-handed alpha
Helix 6	AA6	A	315	328	Right-handed alpha
Helix 7	AA7	A	340	344	Right-handed 310
Helix 8	AA8	A	358	369	Right-handed alpha
Helix 9	AA9	A	369	378	Right-handed alpha
Helix 10	AB1	A	385	399	Right-handed alpha
Helix 11	AB2	A	402	440	Right-handed alpha
Helix 12	AB3	B	47	101	Right-handed alpha
Helix 13	AB4	B	105	128	Right-handed alpha
Helix 14	AB5	B	169	173	Right-handed 310
Helix 15	AB6	B	200	209	Right-handed alpha
Helix 16	AB7	B	289	300	Right-handed alpha
Helix 17	AB8	B	407	454	Right-handed alpha
Helix 18	AB9	C	21	65	Right-handed alpha
Helix 19	AC1	C	66	70	Right-handed 310
Helix 20	AC2	C	152	164	Right-handed alpha
Helix 21	AC3	C	201	207	Right-handed alpha
Helix 22	AC4	C	269	294	Right-handed alpha
Helix 23	AC5	C	315	328	Right-handed alpha
Helix 24	AC6	C	340	344	Right-handed 310
Helix 25	AC7	C	358	369	Right-handed alpha
Helix 26	AC8	C	369	378	Right-handed alpha
Helix 27	AC9	C	385	399	Right-handed alpha
Helix 28	AD1	C	402	440	Right-handed alpha
Helix 29	AD2	D	47	101	Right-handed alpha
Helix 30	AD3	D	105	129	Right-handed alpha
Helix 31	AD4	D	199	209	Right-handed alpha
Helix 32	AD5	D	285	288	Right-handed 310
Helix 33	AD6	D	289	300	Right-handed alpha
Helix 34	AD7	D	407	454	Right-handed alpha
Helix 35	AD8	E	21	65	Right-handed alpha
Helix 36	AD9	E	66	70	Right-handed 310
Helix 37	AE1	E	152	164	Right-handed alpha
Helix 38	AE2	E	201	207	Right-handed alpha
Helix 39	AE3	E	269	294	Right-handed alpha
Helix 40	AE4	E	315	328	Right-handed alpha
Helix 41	AE5	E	340	344	Right-handed 310
Helix 42	AE6	E	358	369	Right-handed alpha
Helix 43	AE7	E	369	378	Right-handed alpha
Helix 44	AE8	E	385	399	Right-handed alpha
Helix 45	AE9	E	402	440	Right-handed alpha
Helix 46	AF1	F	47	101	Right-handed alpha
Helix 47	AF2	F	105	128	Right-handed alpha
Helix 48	AF3	F	169	173	Right-handed 310
Helix 49	AF4	F	199	209	Right-handed alpha
Helix 50	AF5	F	289	300	Right-handed alpha
Helix 51	AF6	F	407	454	Right-handed alpha
Helix 52	AF7	G	21	65	Right-handed alpha
Helix 53	AF8	G	66	70	Right-handed 310
Helix 54	AF9	G	152	164	Right-handed alpha
Helix 55	AG1	G	201	207	Right-handed alpha
Helix 56	AG2	G	269	294	Right-handed alpha
Helix 57	AG3	G	315	328	Right-handed alpha
Helix 58	AG4	G	340	344	Right-handed 310
Helix 59	AG5	G	358	369	Right-handed alpha
Helix 60	AG6	G	369	378	Right-handed alpha
Helix 61	AG7	G	385	399	Right-handed alpha
Helix 62	AG8	G	402	440	Right-handed alpha
Helix 63	AG9	H	47	101	Right-handed alpha
Helix 64	AH1	H	105	129	Right-handed alpha
Helix 65	AH2	H	169	173	Right-handed 310
Helix 66	AH3	H	199	209	Right-handed alpha
Helix 67	AH4	H	289	300	Right-handed alpha
Helix 68	AH5	H	407	454	Right-handed alpha
Helix 69	AH6	I	21	65	Right-handed alpha
Helix 70	AH7	I	66	70	Right-handed 310
Helix 71	AH8	I	152	164	Right-handed alpha
Helix 72	AH9	I	201	207	Right-handed alpha
Helix 73	AI1	I	269	294	Right-handed alpha
Helix 74	AI2	I	315	328	Right-handed alpha
Helix 75	AI3	I	340	344	Right-handed 310
Helix 76	AI4	I	358	369	Right-handed alpha
Helix 77	AI5	I	369	378	Right-handed alpha
Helix 78	AI6	I	385	399	Right-handed alpha
Helix 79	AI7	I	402	440	Right-handed alpha
Helix 80	AI8	J	47	101	Right-handed alpha
Helix 81	AI9	J	105	128	Right-handed alpha
Helix 82	AJ1	J	169	173	Right-handed 310
Helix 83	AJ2	J	199	209	Right-handed alpha
Helix 84	AJ3	J	289	300	Right-handed alpha
Helix 85	AJ4	J	407	454	Right-handed alpha

There are 46 sheets in PDB entry 9M67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	77	first strand
Strand 2	A	261	268	anti-parallel
Strand 3	A	93	99	anti-parallel
Strand 4	A	227	231	anti-parallel
Strand 5	A	234	238	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	86	first strand
Strand 2	A	250	253	anti-parallel
Strand 3	A	242	243	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	175	first strand
Strand 2	A	178	187	anti-parallel
Strand 3	A	105	110	anti-parallel
Strand 4	A	218	222	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	146	first strand
Strand 2	A	129	134	anti-parallel
Strand 3	A	194	198	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	348	first strand
Strand 2	A	355	357	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	184	first strand
Strand 2	B	307	313	anti-parallel
Strand 3	B	324	328	anti-parallel
Strand 4	B	331	333	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	232	first strand
Strand 2	B	246	250	anti-parallel
Strand 3	B	257	259	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	335	337	first strand
Strand 2	B	343	345	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	351	first strand
Strand 2	B	357	365	anti-parallel
Strand 3	B	371	376	anti-parallel
Strand 4	B	379	381	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	77	first strand
Strand 2	C	261	268	anti-parallel
Strand 3	C	93	99	anti-parallel
Strand 4	C	227	231	anti-parallel
Strand 5	C	234	238	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	86	first strand
Strand 2	C	250	253	anti-parallel
Strand 3	C	242	243	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	175	first strand
Strand 2	C	178	187	anti-parallel
Strand 3	C	105	110	anti-parallel
Strand 4	C	218	222	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	146	first strand
Strand 2	C	129	134	anti-parallel
Strand 3	C	194	198	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	346	348	first strand
Strand 2	C	355	357	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	180	184	first strand
Strand 2	D	307	313	anti-parallel
Strand 3	D	324	328	anti-parallel
Strand 4	D	331	333	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	232	first strand
Strand 2	D	246	250	anti-parallel
Strand 3	D	257	258	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	335	337	first strand
Strand 2	D	343	345	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	351	first strand
Strand 2	D	357	365	anti-parallel
Strand 3	D	371	376	anti-parallel
Strand 4	D	379	382	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	72	77	first strand
Strand 2	E	261	268	anti-parallel
Strand 3	E	93	99	anti-parallel
Strand 4	E	227	231	anti-parallel
Strand 5	E	234	238	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	86	first strand
Strand 2	E	250	253	anti-parallel
Strand 3	E	242	243	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	175	first strand
Strand 2	E	178	187	anti-parallel
Strand 3	E	105	110	anti-parallel
Strand 4	E	218	222	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	142	146	first strand
Strand 2	E	129	134	anti-parallel
Strand 3	E	194	198	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	346	348	first strand
Strand 2	E	355	357	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	180	185	first strand
Strand 2	F	307	313	anti-parallel
Strand 3	F	325	328	anti-parallel
Strand 4	F	331	333	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	230	232	first strand
Strand 2	F	246	250	anti-parallel
Strand 3	F	257	258	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	335	337	first strand
Strand 2	F	343	345	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	347	351	first strand
Strand 2	F	357	365	anti-parallel
Strand 3	F	371	376	anti-parallel
Strand 4	F	379	382	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	72	77	first strand
Strand 2	G	261	268	anti-parallel
Strand 3	G	93	99	anti-parallel
Strand 4	G	227	231	anti-parallel
Strand 5	G	234	238	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	83	86	first strand
Strand 2	G	250	253	anti-parallel
Strand 3	G	242	243	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	168	175	first strand
Strand 2	G	178	187	anti-parallel
Strand 3	G	105	110	anti-parallel
Strand 4	G	218	222	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	142	146	first strand
Strand 2	G	129	134	anti-parallel
Strand 3	G	194	198	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	346	348	first strand
Strand 2	G	355	357	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	180	184	first strand
Strand 2	H	307	313	anti-parallel
Strand 3	H	324	328	anti-parallel
Strand 4	H	331	333	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	230	232	first strand
Strand 2	H	246	250	anti-parallel
Strand 3	H	257	259	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	335	337	first strand
Strand 2	H	343	345	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	347	351	first strand
Strand 2	H	357	365	anti-parallel
Strand 3	H	371	376	anti-parallel
Strand 4	H	379	382	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	72	77	first strand
Strand 2	I	261	268	anti-parallel
Strand 3	I	93	99	anti-parallel
Strand 4	I	227	231	anti-parallel
Strand 5	I	234	238	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	83	86	first strand
Strand 2	I	250	253	anti-parallel
Strand 3	I	242	243	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	168	175	first strand
Strand 2	I	178	187	anti-parallel
Strand 3	I	105	110	anti-parallel
Strand 4	I	218	222	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	142	146	first strand
Strand 2	I	129	134	anti-parallel
Strand 3	I	194	198	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	346	348	first strand
Strand 2	I	355	357	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	180	184	first strand
Strand 2	J	307	313	anti-parallel
Strand 3	J	324	328	anti-parallel
Strand 4	J	331	333	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	231	232	first strand
Strand 2	J	246	247	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	249	250	first strand
Strand 2	J	257	258	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	335	337	first strand
Strand 2	J	343	345	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	347	351	first strand
Strand 2	J	357	365	anti-parallel
Strand 3	J	371	376	anti-parallel
Strand 4	J	379	382	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9M67

Analysis of interatomic Contacts of Structural Units in PDB entry:
9M67