Analysis of interatomic Contacts of Structural Units in PDB entry:
9M70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M70 entry

There are 4 chains in PDB entry 9M70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 29ARG 284
B
 LEU 10GLN 272
C
 VAL 29ARG 284
D
 LEU 10GLU 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9M70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 46Right-handed alpha
Helix 2
AA2
A
60 66Right-handed alpha
Helix 3
AA3
A
94 106Right-handed alpha
Helix 4
AA4
A
133 137Right-handed 310
Helix 5
AA5
A
139 157Right-handed alpha
Helix 6
AA6
A
170 173Right-handed 310
Helix 7
AA7
A
174 195Right-handed alpha
Helix 8
AA8
A
213 218Right-handed 310
Helix 9
AA9
A
233 242Right-handed alpha
Helix 10
AB1
A
251 258Right-handed alpha
Helix 11
AB2
A
266 283Right-handed alpha
Helix 12
AB3
B
11 20Right-handed alpha
Helix 13
AB4
B
26 35Right-handed alpha
Helix 14
AB5
B
77 83Right-handed alpha
Helix 15
AB6
B
84 86Right-handed 310
Helix 16
AB7
B
88 105Right-handed alpha
Helix 17
AB8
B
121 127Right-handed alpha
Helix 18
AB9
B
128 142Right-handed alpha
Helix 19
AC1
B
157 162Right-handed alpha
Helix 20
AC2
B
181 190Right-handed alpha
Helix 21
AC3
B
192 194Right-handed 310
Helix 22
AC4
B
195 203Right-handed alpha
Helix 23
AC5
B
206 213Right-handed alpha
Helix 24
AC6
B
230 250Right-handed alpha
Helix 25
AC7
B
253 267Right-handed alpha
Helix 26
AC8
C
39 45Right-handed alpha
Helix 27
AC9
C
60 65Right-handed alpha
Helix 28
AD1
C
66 68Right-handed 310
Helix 29
AD2
C
94 107Right-handed alpha
Helix 30
AD3
C
133 137Right-handed 310
Helix 31
AD4
C
139 157Right-handed alpha
Helix 32
AD5
C
170 172Right-handed 310
Helix 33
AD6
C
173 195Right-handed alpha
Helix 34
AD7
C
213 218Right-handed 310
Helix 35
AD8
C
233 242Right-handed alpha
Helix 36
AD9
C
251 258Right-handed alpha
Helix 37
AE1
C
266 268Right-handed 310
Helix 38
AE2
C
269 284Right-handed alpha
Helix 39
AE3
D
11 20Right-handed alpha
Helix 40
AE4
D
26 35Right-handed alpha
Helix 41
AE5
D
75 82Right-handed alpha
Helix 42
AE6
D
83 86Right-handed 310
Helix 43
AE7
D
88 106Right-handed alpha
Helix 44
AE8
D
121 127Right-handed alpha
Helix 45
AE9
D
128 142Right-handed alpha
Helix 46
AF1
D
157 162Right-handed alpha
Helix 47
AF2
D
181 190Right-handed alpha
Helix 48
AF3
D
195 204Right-handed alpha
Helix 49
AF4
D
206 213Right-handed alpha
Helix 50
AF5
D
230 251Right-handed alpha
Helix 51
AF6
D
253 267Right-handed alpha
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There are 9 sheets in PDB entry 9M70. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
A
112 119anti-parallel
Strand 3
A
122 129anti-parallel
Strand 4
A
160 167parallel
Strand 5
A
198 207parallel
Strand 6
A
220 223parallel
Strand 7
A
263 264parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
B
271 272anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
53 60anti-parallel
Strand 3
B
63 70anti-parallel
Strand 4
B
109 115parallel
Strand 5
B
147 156parallel
Strand 6
B
176 178parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
53 60anti-parallel
Strand 3
B
63 70anti-parallel
Strand 4
B
109 115parallel
Strand 5
B
147 156parallel
Strand 6
B
168 172parallel
Strand 7
B
218 220parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 76first strand
Strand 2
C
112 119anti-parallel
Strand 3
C
122 129anti-parallel
Strand 4
C
160 166parallel
Strand 5
C
198 207parallel
Strand 6
C
229 230parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 76first strand
Strand 2
C
112 119anti-parallel
Strand 3
C
122 129anti-parallel
Strand 4
C
160 166parallel
Strand 5
C
198 207parallel
Strand 6
C
220 223parallel
Strand 7
C
263 264parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 82first strand
Strand 2
D
271 272anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 40first strand
Strand 2
D
53 60anti-parallel
Strand 3
D
63 70anti-parallel
Strand 4
D
109 115parallel
Strand 5
D
147 156parallel
Strand 6
D
176 178parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 40first strand
Strand 2
D
53 60anti-parallel
Strand 3
D
63 70anti-parallel
Strand 4
D
109 115parallel
Strand 5
D
147 156parallel
Strand 6
D
168 172parallel
Strand 7
D
218 220parallel
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