Analysis of interatomic Contacts of Structural Units in PDB entry:
9M7O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M7O entry

There are 5 chains in PDB entry 9M7O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1VAL 148
D
 MET 1ASP 77
E
 MET 1GLY 76
C
 MET 1GLY 76
A
 ILE 117ALA 955
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 9M7O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
3 17Right-handed alpha
Helix 2
AA2
B
60 64Right-handed 310
Helix 3
AA3
B
99 114Right-handed alpha
Helix 4
AA4
B
121 129Right-handed alpha
Helix 5
AA5
B
131 146Right-handed alpha
Helix 6
AA6
D
22 35Right-handed alpha
Helix 7
AA7
E
22 35Right-handed alpha
Helix 8
AA8
C
22 29Right-handed alpha
Helix 9
AA9
C
37 41Right-handed 310
Helix 10
AB1
C
55 59Right-handed 310
Helix 11
AB2
A
118 123Right-handed alpha
Helix 12
AB3
A
123 142Right-handed alpha
Helix 13
AB4
A
143 161Right-handed alpha
Helix 14
AB5
A
170 186Right-handed alpha
Helix 15
AB6
A
187 192Right-handed alpha
Helix 16
AB7
A
193 197Right-handed 310
Helix 17
AB8
A
207 211Right-handed 310
Helix 18
AB9
A
217 222Right-handed alpha
Helix 19
AC1
A
227 236Right-handed alpha
Helix 20
AC2
A
242 273Right-handed alpha
Helix 21
AC3
A
275 293Right-handed alpha
Helix 22
AC4
A
294 298Right-handed 310
Helix 23
AC5
A
308 323Right-handed alpha
Helix 24
AC6
A
324 328Right-handed 310
Helix 25
AC7
A
331 337Right-handed 310
Helix 26
AC8
A
360 370Right-handed alpha
Helix 27
AC9
A
380 396Right-handed alpha
Helix 28
AD1
A
396 406Right-handed alpha
Helix 29
AD2
A
406 422Right-handed alpha
Helix 30
AD3
A
428 461Right-handed alpha
Helix 31
AD4
A
462 485Right-handed alpha
Helix 32
AD5
A
520 525Right-handed alpha
Helix 33
AD6
A
528 542Right-handed alpha
Helix 34
AD7
A
552 554Right-handed 310
Helix 35
AD8
A
555 568Right-handed alpha
Helix 36
AD9
A
574 589Right-handed alpha
Helix 37
AE1
A
600 606Right-handed alpha
Helix 38
AE2
A
609 625Right-handed alpha
Helix 39
AE3
A
636 655Right-handed alpha
Helix 40
AE4
A
655 669Right-handed alpha
Helix 41
AE5
A
669 706Right-handed alpha
Helix 42
AE6
A
721 755Right-handed alpha
Helix 43
AE7
A
756 759Right-handed 310
Helix 44
AE8
A
764 781Right-handed alpha
Helix 45
AE9
A
781 787Right-handed alpha
Helix 46
AF1
A
798 813Right-handed alpha
Helix 47
AF2
A
816 825Right-handed alpha
Helix 48
AF3
A
831 845Right-handed alpha
Helix 49
AF4
A
850 877Right-handed alpha
Helix 50
AF5
A
882 886Right-handed 310
Helix 51
AF6
A
909 917Right-handed alpha
Helix 52
AF7
A
930 934Right-handed 310
Helix 53
AF8
A
937 953Right-handed alpha
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There are 6 sheets in PDB entry 9M7O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 27first strand
Strand 2
B
30 39anti-parallel
Strand 3
B
50 56anti-parallel
Strand 4
B
67 70anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 7anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 49anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
12 16first strand
Strand 2
E
2 7anti-parallel
Strand 3
E
66 69parallel
Strand 4
E
43 45anti-parallel
Strand 5
E
48 49anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 15first strand
Strand 2
C
3 6anti-parallel
Strand 3
C
66 68parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 45first strand
Strand 2
C
48 49anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
906 908first strand
Strand 2
A
897 899anti-parallel
Strand 3
A
935 936anti-parallel
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