Analysis of interatomic Contacts of Structural Units in PDB entry:
9M7R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M7R entry

There are 3 chains in PDB entry 9M7R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 218PRO 583
B
 ASN 218PRO 583
C
 ASN 218PRO 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 9M7R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
222 229Right-handed alpha
Helix 2
AA2
A
259 261Right-handed 310
Helix 3
AA3
A
262 282Right-handed alpha
Helix 4
AA4
A
283 289Right-handed 310
Helix 5
AA5
A
292 320Right-handed alpha
Helix 6
AA6
A
320 329Right-handed alpha
Helix 7
AA7
A
332 337Right-handed 310
Helix 8
AA8
A
338 350Right-handed alpha
Helix 9
AA9
A
360 368Right-handed alpha
Helix 10
AB1
A
368 383Right-handed alpha
Helix 11
AB2
A
395 397Right-handed 310
Helix 12
AB3
A
398 416Right-handed alpha
Helix 13
AB4
A
418 441Right-handed alpha
Helix 14
AB5
A
454 457Right-handed 310
Helix 15
AB6
A
458 476Right-handed alpha
Helix 16
AB7
A
479 500Right-handed alpha
Helix 17
AB8
A
509 515Right-handed 310
Helix 18
AB9
A
516 533Right-handed alpha
Helix 19
AC1
A
535 565Right-handed alpha
Helix 20
AC2
A
574 578Right-handed 310
Helix 21
AC3
B
222 229Right-handed alpha
Helix 22
AC4
B
259 261Right-handed 310
Helix 23
AC5
B
262 282Right-handed alpha
Helix 24
AC6
B
283 289Right-handed 310
Helix 25
AC7
B
292 320Right-handed alpha
Helix 26
AC8
B
320 329Right-handed alpha
Helix 27
AC9
B
332 337Right-handed 310
Helix 28
AD1
B
338 350Right-handed alpha
Helix 29
AD2
B
360 368Right-handed alpha
Helix 30
AD3
B
368 383Right-handed alpha
Helix 31
AD4
B
395 397Right-handed 310
Helix 32
AD5
B
398 416Right-handed alpha
Helix 33
AD6
B
418 441Right-handed alpha
Helix 34
AD7
B
454 457Right-handed 310
Helix 35
AD8
B
458 476Right-handed alpha
Helix 36
AD9
B
479 500Right-handed alpha
Helix 37
AE1
B
509 515Right-handed 310
Helix 38
AE2
B
516 533Right-handed alpha
Helix 39
AE3
B
535 565Right-handed alpha
Helix 40
AE4
B
574 578Right-handed 310
Helix 41
AE5
C
222 229Right-handed alpha
Helix 42
AE6
C
259 261Right-handed 310
Helix 43
AE7
C
262 282Right-handed alpha
Helix 44
AE8
C
283 289Right-handed 310
Helix 45
AE9
C
292 320Right-handed alpha
Helix 46
AF1
C
320 329Right-handed alpha
Helix 47
AF2
C
332 337Right-handed 310
Helix 48
AF3
C
338 350Right-handed alpha
Helix 49
AF4
C
360 368Right-handed alpha
Helix 50
AF5
C
368 383Right-handed alpha
Helix 51
AF6
C
395 397Right-handed 310
Helix 52
AF7
C
398 416Right-handed alpha
Helix 53
AF8
C
418 441Right-handed alpha
Helix 54
AF9
C
454 457Right-handed 310
Helix 55
AG1
C
458 476Right-handed alpha
Helix 56
AG2
C
479 500Right-handed alpha
Helix 57
AG3
C
509 515Right-handed 310
Helix 58
AG4
C
516 533Right-handed alpha
Helix 59
AG5
C
535 565Right-handed alpha
Helix 60
AG6
C
574 578Right-handed 310
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There are 3 sheets in PDB entry 9M7R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
237 238anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 231first strand
Strand 2
B
237 238anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
230 231first strand
Strand 2
C
237 238anti-parallel
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