Analysis of interatomic Contacts of Structural Units in PDB entry:
9M9Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9M9Y entry

There is 1 chain in PDB entry 9M9Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLU 514
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9M9Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
14 36Right-handed alpha
Helix 3
AA3
A
37 40Right-handed 310
Helix 4
AA4
A
51 56Right-handed alpha
Helix 5
AA5
A
68 74Right-handed alpha
Helix 6
AA6
A
106 108Right-handed 310
Helix 7
AA7
A
127 132Right-handed alpha
Helix 8
AA8
A
135 139Right-handed 310
Helix 9
AA9
A
140 165Right-handed alpha
Helix 10
AB1
A
168 187Right-handed alpha
Helix 11
AB2
A
188 190Right-handed 310
Helix 12
AB3
A
192 221Right-handed alpha
Helix 13
AB4
A
223 252Right-handed alpha
Helix 14
AB5
A
254 264Right-handed alpha
Helix 15
AB6
A
264 272Right-handed alpha
Helix 16
AB7
A
279 287Right-handed alpha
Helix 17
AB8
A
288 303Right-handed alpha
Helix 18
AB9
A
314 321Right-handed alpha
Helix 19
AC1
A
339 365Right-handed alpha
Helix 20
AC2
A
366 371Right-handed alpha
Helix 21
AC3
A
373 399Right-handed alpha
Helix 22
AC4
A
400 422Right-handed alpha
Helix 23
AC5
A
426 456Right-handed alpha
Helix 24
AC6
A
457 478Right-handed alpha
Helix 25
AC7
A
478 483Right-handed alpha
Helix 26
AC8
A
484 487Right-handed 310
Helix 27
AC9
A
491 512Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9M9Y.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
110 112anti-parallel
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