Analysis of interatomic Contacts of Structural Units in PDB entry:
9MA7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MA7 entry

There are 7 chains in PDB entry 9MA7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 1LYS 414
B
 GLN 1SER 124
C
 GLN 1LEU 110
D
 GLN 1SER 124
E
 GLU 1LYS 108
F
 GLN 1SER 121
G
 GLN 1LEU 110
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 9MA7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
78 81Right-handed 310
Helix 2
AA2
A
263 267Right-handed 310
Helix 3
AA3
B
62 65Right-handed 310
Helix 4
AA4
B
87 91Right-handed 310
Helix 5
AA5
D
28 32Right-handed 310
Helix 6
AA6
D
87 91Right-handed 310
Helix 7
AA7
E
29 32Right-handed 310
Helix 8
AA8
E
80 84Right-handed 310
Helix 9
AA9
F
28 32Right-handed 310
Helix 10
AB1
F
87 91Right-handed 310
Helix 11
AB2
G
80 84Right-handed 310
Back to top of page

There are 22 sheets in PDB entry 9MA7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 7first strand
Strand 2
A
130 143parallel
Strand 3
A
114 124anti-parallel
Strand 4
A
35 45anti-parallel
Strand 5
A
48 59anti-parallel
Strand 6
A
71 73anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
225 226anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
92 98anti-parallel
Strand 3
A
83 89anti-parallel
Strand 4
A
66 67anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 166first strand
Strand 2
A
169 178anti-parallel
Strand 3
A
251 258anti-parallel
Strand 4
A
233 238anti-parallel
Strand 5
A
216 222anti-parallel
Strand 6
A
198 204anti-parallel
Strand 7
A
188 195anti-parallel
Strand 8
A
271 277anti-parallel
Strand 9
A
292 296anti-parallel
Strand 10
A
162 166parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 314first strand
Strand 2
A
406 413parallel
Strand 3
A
392 399anti-parallel
Strand 4
A
338 343anti-parallel
Strand 5
A
355 358anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 324first strand
Strand 2
A
380 385anti-parallel
Strand 3
A
370 374anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
118 122parallel
Strand 3
B
92 97anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
45 51anti-parallel
Strand 6
B
59 60anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 12first strand
Strand 2
C
105 109parallel
Strand 3
C
86 92anti-parallel
Strand 4
C
35 39anti-parallel
Strand 5
C
45 49anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 12first strand
Strand 2
C
105 109parallel
Strand 3
C
86 92anti-parallel
Strand 4
C
99 101anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 23first strand
Strand 2
C
71 77anti-parallel
Strand 3
C
63 68anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 6first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
118 122parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
34 39anti-parallel
Strand 5
D
45 51anti-parallel
Strand 6
D
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 5first strand
Strand 2
E
24 25anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 13first strand
Strand 2
E
103 107parallel
Strand 3
E
86 91anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
46 50anti-parallel
Strand 6
E
54 55anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 13first strand
Strand 2
E
103 107parallel
Strand 3
E
86 91anti-parallel
Strand 4
E
98 99anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
19 22first strand
Strand 2
E
71 76anti-parallel
Strand 3
E
63 68anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 7first strand
Strand 2
F
17 25anti-parallel
Strand 3
F
78 84anti-parallel
Strand 4
F
68 70anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
11 12first strand
Strand 2
F
115 119parallel
Strand 3
F
92 99anti-parallel
Strand 4
F
34 40anti-parallel
Strand 5
F
47 52anti-parallel
Strand 6
F
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
9 12first strand
Strand 2
G
105 109parallel
Strand 3
G
85 93anti-parallel
Strand 4
G
35 39anti-parallel
Strand 5
G
46 49anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
9 12first strand
Strand 2
G
105 109parallel
Strand 3
G
85 93anti-parallel
Strand 4
G
98 100anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
18 23first strand
Strand 2
G
71 76anti-parallel
Strand 3
G
63 68anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il