Analysis of interatomic Contacts of Structural Units in PDB entry:
9MAQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MAQ entry

There are 3 chains in PDB entry 9MAQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0MET 602
A
 PHE 604VAL 752
B
 GLY 0LYS 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 9MAQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 12Right-handed alpha
Helix 2
AA2
A
19 38Right-handed alpha
Helix 3
AA3
A
61 69Right-handed alpha
Helix 4
AA4
A
71 82Right-handed alpha
Helix 5
AA5
A
85 93Right-handed alpha
Helix 6
AA6
A
101 117Right-handed alpha
Helix 7
AA7
A
200 204Right-handed 310
Helix 8
AA8
A
214 219Right-handed alpha
Helix 9
AA9
A
229 258Right-handed alpha
Helix 10
AB1
A
261 267Right-handed 310
Helix 11
AB2
A
276 279Right-handed 310
Helix 12
AB3
A
280 292Right-handed alpha
Helix 13
AB4
A
295 305Right-handed alpha
Helix 14
AB5
A
315 319Right-handed 310
Helix 15
AB6
A
324 329Right-handed alpha
Helix 16
AB7
A
331 333Right-handed 310
Helix 17
AB8
A
334 349Right-handed alpha
Helix 18
AB9
A
365 372Right-handed alpha
Helix 19
AC1
A
380 390Right-handed alpha
Helix 20
AC2
A
392 397Right-handed alpha
Helix 21
AC3
A
411 416Right-handed alpha
Helix 22
AC4
A
420 430Right-handed alpha
Helix 23
AC5
A
432 437Right-handed 310
Helix 24
AC6
A
438 449Right-handed 310
Helix 25
AC7
A
451 477Right-handed alpha
Helix 26
AC8
A
495 498Right-handed 310
Helix 27
AC9
A
499 516Right-handed alpha
Helix 28
AD1
A
536 556Right-handed alpha
Helix 29
AD2
A
572 580Right-handed alpha
Helix 30
AD3
A
581 583Right-handed 310
Helix 31
AD4
A
599 607Right-handed alpha
Helix 32
AD5
A
617 627Right-handed alpha
Helix 33
AD6
A
628 631Right-handed 310
Helix 34
AD7
A
637 648Right-handed alpha
Helix 35
AD8
A
651 659Right-handed alpha
Helix 36
AD9
A
659 668Right-handed alpha
Helix 37
AE1
A
671 678Right-handed alpha
Helix 38
AE2
A
679 693Right-handed alpha
Helix 39
AE3
A
697 716Right-handed alpha
Helix 40
AE4
A
718 733Right-handed alpha
Helix 41
AE5
A
734 736Right-handed 310
Helix 42
AE6
A
737 749Right-handed alpha
Helix 43
AE7
B
2 12Right-handed alpha
Helix 44
AE8
B
19 39Right-handed alpha
Helix 45
AE9
B
61 69Right-handed alpha
Helix 46
AF1
B
71 82Right-handed alpha
Helix 47
AF2
B
85 93Right-handed alpha
Helix 48
AF3
B
101 117Right-handed alpha
Helix 49
AF4
B
200 204Right-handed 310
Helix 50
AF5
B
214 219Right-handed alpha
Helix 51
AF6
B
229 258Right-handed alpha
Helix 52
AF7
B
261 267Right-handed 310
Helix 53
AF8
B
276 279Right-handed 310
Helix 54
AF9
B
280 293Right-handed alpha
Helix 55
AG1
B
295 305Right-handed alpha
Helix 56
AG2
B
315 319Right-handed 310
Helix 57
AG3
B
324 331Right-handed alpha
Helix 58
AG4
B
334 349Right-handed alpha
Helix 59
AG5
B
365 372Right-handed alpha
Helix 60
AG6
B
380 390Right-handed alpha
Helix 61
AG7
B
392 397Right-handed alpha
Helix 62
AG8
B
411 416Right-handed alpha
Helix 63
AG9
B
420 430Right-handed alpha
Helix 64
AH1
B
432 437Right-handed 310
Helix 65
AH2
B
438 449Right-handed 310
Helix 66
AH3
B
451 477Right-handed alpha
Helix 67
AH4
B
495 498Right-handed 310
Helix 68
AH5
B
499 516Right-handed alpha
Helix 69
AH6
B
536 556Right-handed alpha
Helix 70
AH7
B
572 580Right-handed alpha
Helix 71
AH8
B
599 607Right-handed alpha
Helix 72
AH9
B
617 627Right-handed alpha
Helix 73
AI1
B
628 631Right-handed 310
Helix 74
AI2
B
637 648Right-handed alpha
Helix 75
AI3
B
651 659Right-handed alpha
Helix 76
AI4
B
659 668Right-handed alpha
Helix 77
AI5
B
671 678Right-handed alpha
Helix 78
AI6
B
679 692Right-handed alpha
Helix 79
AI7
B
697 716Right-handed alpha
Helix 80
AI8
B
718 732Right-handed alpha
Helix 81
AI9
B
733 736Right-handed 310
Helix 82
AJ1
B
737 749Right-handed alpha
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There are 10 sheets in PDB entry 9MAQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 158first strand
Strand 2
A
171 182anti-parallel
Strand 3
A
164 166anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 158first strand
Strand 2
A
171 182anti-parallel
Strand 3
A
188 196anti-parallel
Strand 4
A
121 126parallel
Strand 5
A
48 52parallel
Strand 6
A
269 274parallel
Strand 7
A
307 310parallel
Strand 8
A
376 378parallel
Strand 9
A
403 405parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 138first strand
Strand 2
A
141 145anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 323first strand
Strand 2
A
362 364anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 567first strand
Strand 2
A
524 529parallel
Strand 3
A
486 491parallel
Strand 4
A
585 588parallel
Strand 5
A
610 613parallel
Strand 6
A
632 633parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 158first strand
Strand 2
B
171 182anti-parallel
Strand 3
B
164 166anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 158first strand
Strand 2
B
171 182anti-parallel
Strand 3
B
188 196anti-parallel
Strand 4
B
121 126parallel
Strand 5
B
48 52parallel
Strand 6
B
269 274parallel
Strand 7
B
307 310parallel
Strand 8
B
376 378parallel
Strand 9
B
403 405parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 138first strand
Strand 2
B
141 145anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 323first strand
Strand 2
B
362 364anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
563 567first strand
Strand 2
B
524 529parallel
Strand 3
B
486 491parallel
Strand 4
B
585 588parallel
Strand 5
B
610 613parallel
Strand 6
B
632 633parallel
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