Analysis of interatomic Contacts of Structural Units in PDB entry:
9MBO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MBO entry

There are 2 chains in PDB entry 9MBO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 377PRO 415
B
 SER 46LEU 908
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9MBO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
377 412Right-handed alpha
Helix 2
AA2
B
47 64Right-handed alpha
Helix 3
AA3
B
70 88Right-handed alpha
Helix 4
AA4
B
99 101Right-handed 310
Helix 5
AA5
B
102 113Right-handed alpha
Helix 6
AA6
B
116 131Right-handed alpha
Helix 7
AA7
B
140 145Right-handed alpha
Helix 8
AA8
B
150 154Right-handed 310
Helix 9
AA9
B
155 173Right-handed alpha
Helix 10
AB1
B
180 198Right-handed alpha
Helix 11
AB2
B
200 211Right-handed alpha
Helix 12
AB3
B
213 217Right-handed 310
Helix 13
AB4
B
225 236Right-handed alpha
Helix 14
AB5
B
243 259Right-handed alpha
Helix 15
AB6
B
261 273Right-handed alpha
Helix 16
AB7
B
274 284Right-handed alpha
Helix 17
AB8
B
287 302Right-handed alpha
Helix 18
AB9
B
313 322Right-handed alpha
Helix 19
AC1
B
325 338Right-handed alpha
Helix 20
AC2
B
345 350Right-handed alpha
Helix 21
AC3
B
351 354Right-handed 310
Helix 22
AC4
B
367 382Right-handed alpha
Helix 23
AC5
B
394 400Right-handed alpha
Helix 24
AC6
B
401 403Right-handed 310
Helix 25
AC7
B
404 412Right-handed alpha
Helix 26
AC8
B
412 418Right-handed alpha
Helix 27
AC9
B
421 429Right-handed alpha
Helix 28
AD1
B
437 452Right-handed alpha
Helix 29
AD2
B
474 489Right-handed alpha
Helix 30
AD3
B
494 502Right-handed alpha
Helix 31
AD4
B
503 505Right-handed 310
Helix 32
AD5
B
511 526Right-handed alpha
Helix 33
AD6
B
531 544Right-handed alpha
Helix 34
AD7
B
552 555Right-handed 310
Helix 35
AD8
B
556 566Right-handed alpha
Helix 36
AD9
B
570 572Right-handed 310
Helix 37
AE1
B
573 580Right-handed alpha
Helix 38
AE2
B
584 600Right-handed alpha
Helix 39
AE3
B
605 617Right-handed alpha
Helix 40
AE4
B
649 661Right-handed alpha
Helix 41
AE5
B
664 681Right-handed alpha
Helix 42
AE6
B
683 688Right-handed alpha
Helix 43
AE7
B
689 698Right-handed alpha
Helix 44
AE8
B
703 714Right-handed alpha
Helix 45
AE9
B
718 733Right-handed alpha
Helix 46
AF1
B
738 752Right-handed alpha
Helix 47
AF2
B
755 770Right-handed alpha
Helix 48
AF3
B
771 774Right-handed 310
Helix 49
AF4
B
789 803Right-handed alpha
Helix 50
AF5
B
804 806Right-handed 310
Helix 51
AF6
B
814 825Right-handed 310
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There are 4 sheets in PDB entry 9MBO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
776 777first strand
Strand 2
B
826 827anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
781 782first strand
Strand 2
B
787 788anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
830 833first strand
Strand 2
B
896 902parallel
Strand 3
B
887 889anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
861 869first strand
Strand 2
B
843 850anti-parallel
Strand 3
B
878 882anti-parallel
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