Analysis of interatomic Contacts of Structural Units in PDB entry:
9ME6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ME6 entry

There are 7 chains in PDB entry 9ME6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1THR 158
H
 GLN 1ILE 215
L
 GLU 1CYS 213
I
 GLU 1THR 208
M
 ASP 1ARG 197
J
 GLU 1SER 198
N
 GLN 1LYS 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9ME6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 70Right-handed alpha
Helix 2
AA2
H
28 32Right-handed 310
Helix 3
AA3
H
87 91Right-handed 310
Helix 4
AA4
H
161 163Right-handed 310
Helix 5
AA5
L
120 126Right-handed alpha
Helix 6
AA6
L
182 186Right-handed alpha
Helix 7
AA7
I
28 32Right-handed 310
Helix 8
AA8
I
87 90Right-handed 310
Helix 9
AA9
I
160 162Right-handed 310
Helix 10
AB1
M
79 83Right-handed 310
Helix 11
AB2
M
121 128Right-handed alpha
Helix 12
AB3
M
183 188Right-handed alpha
Helix 13
AB4
J
28 32Right-handed 310
Helix 14
AB5
J
62 65Right-handed 310
Helix 15
AB6
J
87 91Right-handed 310
Helix 16
AB7
J
166 170Right-handed 310
Helix 17
AB8
N
78 82Right-handed 310
Helix 18
AB9
N
120 126Right-handed alpha
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There are 34 sheets in PDB entry 9ME6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
2 5anti-parallel
Strand 3
A
42 45anti-parallel
Strand 4
A
101 102anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 22first strand
Strand 2
A
142 150parallel
Strand 3
A
125 135anti-parallel
Strand 4
A
54 63anti-parallel
Strand 5
A
93 95anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
105 111anti-parallel
Strand 3
A
71 77anti-parallel
Strand 4
A
80 84anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 120first strand
Strand 2
A
154 156anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
69 73anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
112 116parallel
Strand 3
H
92 98anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 52anti-parallel
Strand 6
H
57 60anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
112 116parallel
Strand 3
H
92 98anti-parallel
Strand 4
H
107 108anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
125 129first strand
Strand 2
H
141 150anti-parallel
Strand 3
H
180 188anti-parallel
Strand 4
H
168 170anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
156 159first strand
Strand 2
H
199 204anti-parallel
Strand 3
H
209 214anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
5 6first strand
Strand 2
L
19 29anti-parallel
Strand 3
L
61 74anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
101 105parallel
Strand 3
L
84 89anti-parallel
Strand 4
L
32 37anti-parallel
Strand 5
L
44 48anti-parallel
Strand 6
L
52 53anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
101 105parallel
Strand 3
L
84 89anti-parallel
Strand 4
L
96 97anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
115 117first strand
Strand 2
L
128 134anti-parallel
Strand 3
L
174 181anti-parallel
Strand 4
L
158 162anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
152 153first strand
Strand 2
L
143 149anti-parallel
Strand 3
L
190 197anti-parallel
Strand 4
L
204 209anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
3 6first strand
Strand 2
I
17 25anti-parallel
Strand 3
I
78 84anti-parallel
Strand 4
I
68 73anti-parallel
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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
10 12first strand
Strand 2
I
111 115parallel
Strand 3
I
92 100anti-parallel
Strand 4
I
33 40anti-parallel
Strand 5
I
45 51anti-parallel
Strand 6
I
58 60anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
10 12first strand
Strand 2
I
111 115parallel
Strand 3
I
92 100anti-parallel
Strand 4
I
103 107anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
124 128first strand
Strand 2
I
139 149anti-parallel
Strand 3
I
178 188anti-parallel
Strand 4
I
167 169anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
124 128first strand
Strand 2
I
139 149anti-parallel
Strand 3
I
178 188anti-parallel
Strand 4
I
173 175anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
155 158first strand
Strand 2
I
199 202anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
4 6first strand
Strand 2
M
19 25anti-parallel
Strand 3
M
70 75anti-parallel
Strand 4
M
62 67anti-parallel
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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 13first strand
Strand 2
M
102 106parallel
Strand 3
M
85 90anti-parallel
Strand 4
M
33 38anti-parallel
Strand 5
M
44 49anti-parallel
Strand 6
M
53 54anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 13first strand
Strand 2
M
102 106parallel
Strand 3
M
85 90anti-parallel
Strand 4
M
97 98anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
114 118first strand
Strand 2
M
129 139anti-parallel
Strand 3
M
173 182anti-parallel
Strand 4
M
159 163anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
153 155first strand
Strand 2
M
145 150anti-parallel
Strand 3
M
192 197anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
3 6first strand
Strand 2
J
18 25anti-parallel
Strand 3
J
78 83anti-parallel
Strand 4
J
68 73anti-parallel
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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
119 123parallel
Strand 3
J
92 99anti-parallel
Strand 4
J
33 40anti-parallel
Strand 5
J
44 51anti-parallel
Strand 6
J
58 60anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
119 123parallel
Strand 3
J
92 99anti-parallel
Strand 4
J
112 115anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
132 136first strand
Strand 2
J
147 157anti-parallel
Strand 3
J
186 196anti-parallel
Strand 4
J
175 177anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
132 136first strand
Strand 2
J
147 157anti-parallel
Strand 3
J
186 196anti-parallel
Strand 4
J
181 183anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
4 6first strand
Strand 2
N
18 25anti-parallel
Strand 3
N
69 75anti-parallel
Strand 4
N
61 66anti-parallel
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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
10 14first strand
Strand 2
N
101 106parallel
Strand 3
N
84 89anti-parallel
Strand 4
N
33 37anti-parallel
Strand 5
N
44 48anti-parallel
Strand 6
N
52 53anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
10 14first strand
Strand 2
N
101 106parallel
Strand 3
N
84 89anti-parallel
Strand 4
N
96 97anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
113 117first strand
Strand 2
N
128 138anti-parallel
Strand 3
N
172 181anti-parallel
Strand 4
N
158 162anti-parallel
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