Analysis of interatomic Contacts of Structural Units in PDB entry:
9MFX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MFX entry

There is 1 chain in PDB entry 9MFX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1241MET 4092
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 9MFX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1241 1250Right-handed alpha
Helix 2
AA2
A
1257 1274Right-handed alpha
Helix 3
AA3
A
1276 1282Right-handed alpha
Helix 4
AA4
A
1282 1298Right-handed alpha
Helix 5
AA5
A
1299 1306Right-handed alpha
Helix 6
AA6
A
1311 1322Right-handed alpha
Helix 7
AA7
A
1328 1334Right-handed alpha
Helix 8
AA8
A
1338 1345Right-handed alpha
Helix 9
AA9
A
1350 1379Right-handed alpha
Helix 10
AB1
A
1398 1415Right-handed alpha
Helix 11
AB2
A
1416 1422Right-handed 310
Helix 12
AB3
A
1424 1459Right-handed alpha
Helix 13
AB4
A
1462 1469Right-handed alpha
Helix 14
AB5
A
1469 1492Right-handed alpha
Helix 15
AB6
A
1496 1502Right-handed 310
Helix 16
AB7
A
1505 1532Right-handed alpha
Helix 17
AB8
A
1534 1540Right-handed 310
Helix 18
AB9
A
1542 1551Right-handed alpha
Helix 19
AC1
A
1557 1567Right-handed alpha
Helix 20
AC2
A
1603 1633Right-handed alpha
Helix 21
AC3
A
1635 1641Right-handed alpha
Helix 22
AC4
A
1644 1667Right-handed alpha
Helix 23
AC5
A
1668 1689Right-handed alpha
Helix 24
AC6
A
1693 1718Right-handed alpha
Helix 25
AC7
A
1720 1731Right-handed alpha
Helix 26
AC8
A
1742 1745Right-handed 310
Helix 27
AC9
A
1772 1788Right-handed alpha
Helix 28
AD1
A
1801 1813Right-handed alpha
Helix 29
AD2
A
1827 1842Right-handed alpha
Helix 30
AD3
A
1854 1875Right-handed alpha
Helix 31
AD4
A
1909 1914Right-handed alpha
Helix 32
AD5
A
1925 1937Right-handed alpha
Helix 33
AD6
A
1941 1960Right-handed alpha
Helix 34
AD7
A
1969 1981Right-handed alpha
Helix 35
AD8
A
1982 1985Right-handed 310
Helix 36
AD9
A
1990 2006Right-handed alpha
Helix 37
AE1
A
2007 2022Right-handed alpha
Helix 38
AE2
A
2031 2044Right-handed alpha
Helix 39
AE3
A
2050 2067Right-handed alpha
Helix 40
AE4
A
2079 2096Right-handed alpha
Helix 41
AE5
A
2110 2115Right-handed alpha
Helix 42
AE6
A
2129 2139Right-handed alpha
Helix 43
AE7
A
2159 2164Right-handed alpha
Helix 44
AE8
A
2166 2171Right-handed alpha
Helix 45
AE9
A
2203 2210Right-handed alpha
Helix 46
AF1
A
2221 2238Right-handed alpha
Helix 47
AF2
A
2239 2241Right-handed 310
Helix 48
AF3
A
2242 2257Right-handed alpha
Helix 49
AF4
A
2258 2270Right-handed alpha
Helix 50
AF5
A
2279 2297Right-handed alpha
Helix 51
AF6
A
2306 2327Right-handed alpha
Helix 52
AF7
A
2332 2346Right-handed alpha
Helix 53
AF8
A
2381 2385Right-handed 310
Helix 54
AF9
A
2394 2410Right-handed alpha
Helix 55
AG1
A
2423 2434Right-handed alpha
Helix 56
AG2
A
2450 2459Right-handed alpha
Helix 57
AG3
A
2500 2512Right-handed alpha
Helix 58
AG4
A
2547 2552Right-handed alpha
Helix 59
AG5
A
2565 2579Right-handed alpha
Helix 60
AG6
A
2580 2581Right-handed 310
Helix 61
AG7
A
2582 2587Right-handed 310
Helix 62
AG8
A
2588 2607Right-handed alpha
Helix 63
AG9
A
2618 2635Right-handed alpha
Helix 64
AH1
A
2640 2657Right-handed alpha
Helix 65
AH2
A
2662 2681Right-handed alpha
Helix 66
AH3
A
2708 2727Right-handed alpha
Helix 67
AH4
A
2735 2751Right-handed alpha
Helix 68
AH5
A
2765 2777Right-handed alpha
Helix 69
AH6
A
2791 2809Right-handed alpha
Helix 70
AH7
A
2824 2837Right-handed alpha
Helix 71
AH8
A
2846 2863Right-handed alpha
Helix 72
AH9
A
2869 2885Right-handed alpha
Helix 73
AI1
A
2896 2905Right-handed alpha
Helix 74
AI2
A
2905 2911Right-handed alpha
Helix 75
AI3
A
2921 2933Right-handed alpha
Helix 76
AI4
A
2960 2980Right-handed alpha
Helix 77
AI5
A
2990 3027Right-handed alpha
Helix 78
AI6
A
3299 3307Right-handed alpha
Helix 79
AI7
A
3308 3319Right-handed alpha
Helix 80
AI8
A
3319 3333Right-handed alpha
Helix 81
AI9
A
3334 3337Right-handed 310
Helix 82
AJ1
A
3338 3356Right-handed alpha
Helix 83
AJ2
A
3365 3371Right-handed alpha
Helix 84
AJ3
A
3372 3383Right-handed alpha
Helix 85
AJ4
A
3387 3400Right-handed alpha
Helix 86
AJ5
A
3412 3423Right-handed alpha
Helix 87
AJ6
A
3424 3426Right-handed 310
Helix 88
AJ7
A
3435 3447Right-handed alpha
Helix 89
AJ8
A
3459 3461Right-handed 310
Helix 90
AJ9
A
3462 3467Right-handed alpha
Helix 91
AK1
A
3506 3513Right-handed alpha
Helix 92
AK2
A
3522 3538Right-handed alpha
Helix 93
AK3
A
3538 3573Right-handed alpha
Helix 94
AK4
A
3579 3639Right-handed alpha
Helix 95
AK5
A
3645 3658Right-handed alpha
Helix 96
AK6
A
3669 3687Right-handed alpha
Helix 97
AK7
A
3691 3711Right-handed alpha
Helix 98
AK8
A
3712 3727Right-handed alpha
Helix 99
AK9
A
3741 3753Right-handed alpha
Helix 100
AL1
A
3755 3766Right-handed alpha
Helix 101
AL2
A
3773 3781Right-handed alpha
Helix 102
AL3
A
3796 3806Right-handed alpha
Helix 103
AL4
A
3818 3836Right-handed alpha
Helix 104
AL5
A
3844 3846Right-handed 310
Helix 105
AL6
A
3847 3854Right-handed alpha
Helix 106
AL7
A
3854 3862Right-handed alpha
Helix 107
AL8
A
3885 3892Right-handed alpha
Helix 108
AL9
A
3902 3915Right-handed alpha
Helix 109
AM1
A
3916 3918Right-handed 310
Helix 110
AM2
A
3922 3945Right-handed alpha
Helix 111
AM3
A
3957 3975Right-handed alpha
Helix 112
AM4
A
3981 3990Right-handed alpha
Helix 113
AM5
A
4000 4016Right-handed alpha
Helix 114
AM6
A
4037 4052Right-handed alpha
Helix 115
AM7
A
4057 4062Right-handed alpha
Helix 116
AM8
A
4066 4092Right-handed alpha
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There are 17 sheets in PDB entry 9MFX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1384 1387first strand
Strand 2
A
1393 1396anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1569 1574first strand
Strand 2
A
1578 1584anti-parallel
Strand 3
A
1589 1590anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1569 1574first strand
Strand 2
A
1578 1584anti-parallel
Strand 3
A
1596 1597anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1733 1736first strand
Strand 2
A
1747 1751anti-parallel
Strand 3
A
1754 1757anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1818 1821first strand
Strand 2
A
1844 1848parallel
Strand 3
A
1893 1898parallel
Strand 4
A
1791 1795parallel
Strand 5
A
1916 1920parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1879 1881first strand
Strand 2
A
1884 1886anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2098 2104first strand
Strand 2
A
2148 2154parallel
Strand 3
A
2191 2196parallel
Strand 4
A
2069 2073parallel
Strand 5
A
2211 2214parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2175 2177first strand
Strand 2
A
2183 2185anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2358 2359first strand
Strand 2
A
2370 2371anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2438 2444first strand
Strand 2
A
2481 2487parallel
Strand 3
A
2529 2535parallel
Strand 4
A
2414 2417parallel
Strand 5
A
2555 2558parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2473 2475first strand
Strand 2
A
2523 2527parallel
Strand 3
A
2514 2516anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2696 2697first strand
Strand 2
A
2705 2706anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2780 2782first strand
Strand 2
A
2813 2818parallel
Strand 3
A
2886 2891parallel
Strand 4
A
2755 2759parallel
Strand 5
A
2912 2916parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3427 3429first strand
Strand 2
A
3450 3452parallel
Strand 3
A
3494 3498parallel
Strand 4
A
3405 3408parallel
Strand 5
A
3514 3517parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3478 3481first strand
Strand 2
A
3484 3487anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3812 3813first strand
Strand 2
A
3839 3841parallel
Strand 3
A
3873 3876parallel
Strand 4
A
3785 3789parallel
Strand 5
A
3893 3896parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4020 4021first strand
Strand 2
A
4029 4030anti-parallel
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