Analysis of interatomic Contacts of Structural Units in PDB entry:
9MG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MG6 entry

There are 3 chains in PDB entry 9MG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 141PRO 435
B
 SER 141PRO 435
C
 SER 141PRO 435
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 9MG6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
141 162Right-handed alpha
Helix 2
AA2
A
178 186Right-handed alpha
Helix 3
AA3
A
196 205Right-handed alpha
Helix 4
AA4
A
228 234Right-handed alpha
Helix 5
AA5
A
251 257Right-handed 310
Helix 6
AA6
A
258 272Right-handed alpha
Helix 7
AA7
A
285 294Right-handed alpha
Helix 8
AA8
A
317 322Right-handed alpha
Helix 9
AA9
A
351 362Right-handed alpha
Helix 10
AB1
A
372 380Right-handed alpha
Helix 11
AB2
A
381 383Right-handed 310
Helix 12
AB3
A
388 394Right-handed alpha
Helix 13
AB4
A
406 414Right-handed alpha
Helix 14
AB5
B
142 162Right-handed alpha
Helix 15
AB6
B
178 186Right-handed alpha
Helix 16
AB7
B
196 209Right-handed alpha
Helix 17
AB8
B
228 234Right-handed alpha
Helix 18
AB9
B
251 257Right-handed 310
Helix 19
AC1
B
258 272Right-handed alpha
Helix 20
AC2
B
285 294Right-handed alpha
Helix 21
AC3
B
317 322Right-handed alpha
Helix 22
AC4
B
351 362Right-handed alpha
Helix 23
AC5
B
372 380Right-handed alpha
Helix 24
AC6
B
381 383Right-handed 310
Helix 25
AC7
B
388 394Right-handed alpha
Helix 26
AC8
B
406 414Right-handed alpha
Helix 27
AC9
C
142 162Right-handed alpha
Helix 28
AD1
C
178 186Right-handed alpha
Helix 29
AD2
C
196 209Right-handed alpha
Helix 30
AD3
C
228 234Right-handed alpha
Helix 31
AD4
C
251 257Right-handed 310
Helix 32
AD5
C
258 272Right-handed alpha
Helix 33
AD6
C
285 294Right-handed alpha
Helix 34
AD7
C
317 322Right-handed alpha
Helix 35
AD8
C
351 362Right-handed alpha
Helix 36
AD9
C
372 380Right-handed alpha
Helix 37
AE1
C
381 383Right-handed 310
Helix 38
AE2
C
388 394Right-handed alpha
Helix 39
AE3
C
406 414Right-handed alpha
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There are 6 sheets in PDB entry 9MG6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 221first strand
Strand 2
A
189 194parallel
Strand 3
A
167 171parallel
Strand 4
A
243 249parallel
Strand 5
A
273 284parallel
Strand 6
A
416 423anti-parallel
Strand 7
A
364 371anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 306first strand
Strand 2
A
310 314anti-parallel
Strand 3
A
333 338anti-parallel
Strand 4
A
342 348anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 221first strand
Strand 2
B
189 194parallel
Strand 3
B
167 171parallel
Strand 4
B
243 249parallel
Strand 5
B
273 284parallel
Strand 6
B
416 423anti-parallel
Strand 7
B
364 371anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 306first strand
Strand 2
B
310 314anti-parallel
Strand 3
B
333 338anti-parallel
Strand 4
B
342 348anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 221first strand
Strand 2
C
189 194parallel
Strand 3
C
167 171parallel
Strand 4
C
243 249parallel
Strand 5
C
273 284parallel
Strand 6
C
416 423anti-parallel
Strand 7
C
364 371anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
304 306first strand
Strand 2
C
310 314anti-parallel
Strand 3
C
333 338anti-parallel
Strand 4
C
342 348anti-parallel
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