Analysis of interatomic Contacts of Structural Units in PDB entry:
9MGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MGJ entry

There is 1 chain in PDB entry 9MGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -3LEU 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 9MGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 34Right-handed alpha
Helix 2
AA2
A
42 46Right-handed 310
Helix 3
AA3
A
66 80Right-handed alpha
Helix 4
AA4
A
117 121Right-handed 310
Helix 5
AA5
A
131 145Right-handed alpha
Helix 6
AA6
A
166 174Right-handed alpha
Helix 7
AA7
A
182 193Right-handed alpha
Helix 8
AA8
A
214 234Right-handed alpha
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There are 2 sheets in PDB entry 9MGJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 41first strand
Strand 2
A
48 53anti-parallel
Strand 3
A
56 62anti-parallel
Strand 4
A
16 20parallel
Strand 5
A
85 94parallel
Strand 6
A
178 180anti-parallel
Strand 7
A
150 156parallel
Strand 8
A
104 112parallel
Strand 9
A
128 129anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 41first strand
Strand 2
A
48 53anti-parallel
Strand 3
A
56 62anti-parallel
Strand 4
A
16 20parallel
Strand 5
A
85 94parallel
Strand 6
A
196 206parallel
Strand 7
A
104 112anti-parallel
Strand 8
A
128 129anti-parallel
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