Analysis of interatomic Contacts of Structural Units in PDB entry:
9MGW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MGW entry

There are 23 chains in PDB entry 9MGW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	THR 32	LEU 228
2	ALA 41	VAL 261
3	ASP 90	GLY 319
7	ASP 43	PRO 251
8	SER 28	ASN 253
9	ASN 35	THR 221
A	LYS 12	GLY 751
B	THR 3	PHE 734
C	ALA 2	TYR 81
D	PRO 60	ILE 202
E	GLU 60	PRO 123
F	ASP 68	ARG 232
G	LEU 37	ARG 141
H	TYR 36	SER 133
J	MET 1	PHE 41
L	LYS 44	SER 203
O	ASN 42	TRP 129
a	THR 32	GLY 227
b	MET 29	ALA 251
c	ASP 43	PRO 251
I	ALA 68	ARG 108
K	SER 41	LEU 123
T	LEU 148	ASN 352

There are179 helices in PDB entry 9MGW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	64	95	Right-handed alpha
Helix 2	AA2	1	102	104	Right-handed 310
Helix 3	AA3	1	105	110	Right-handed alpha
Helix 4	AA4	1	123	144	Right-handed alpha
Helix 5	AA5	1	147	153	Right-handed alpha
Helix 6	AA6	1	155	159	Right-handed 310
Helix 7	AA7	1	166	198	Right-handed alpha
Helix 8	AA8	1	201	212	Right-handed alpha
Helix 9	AA9	1	217	222	Right-handed alpha
Helix 10	AB1	2	74	106	Right-handed alpha
Helix 11	AB2	2	112	116	Right-handed 310
Helix 12	AB3	2	121	147	Right-handed alpha
Helix 13	AB4	2	165	192	Right-handed alpha
Helix 14	AB5	2	196	207	Right-handed alpha
Helix 15	AB6	2	218	243	Right-handed alpha
Helix 16	AB7	3	100	104	Right-handed 310
Helix 17	AB8	3	135	166	Right-handed alpha
Helix 18	AB9	3	176	180	Right-handed 310
Helix 19	AC1	3	195	220	Right-handed alpha
Helix 20	AC2	3	222	226	Right-handed 310
Helix 21	AC3	3	232	236	Right-handed 310
Helix 22	AC4	3	246	251	Right-handed alpha
Helix 23	AC5	3	258	291	Right-handed alpha
Helix 24	AC6	3	293	304	Right-handed alpha
Helix 25	AC7	3	309	315	Right-handed alpha
Helix 26	AC8	7	75	109	Right-handed alpha
Helix 27	AC9	7	118	125	Right-handed alpha
Helix 28	AD1	7	132	155	Right-handed alpha
Helix 29	AD2	7	191	224	Right-handed alpha
Helix 30	AD3	7	226	237	Right-handed alpha
Helix 31	AD4	8	40	44	Right-handed 310
Helix 32	AD5	8	62	96	Right-handed alpha
Helix 33	AD6	8	106	113	Right-handed alpha
Helix 34	AD7	8	119	144	Right-handed alpha
Helix 35	AD8	8	146	150	Right-handed 310
Helix 36	AD9	8	156	161	Right-handed 310
Helix 37	AE1	8	170	174	Right-handed 310
Helix 38	AE2	8	182	214	Right-handed alpha
Helix 39	AE3	8	217	228	Right-handed alpha
Helix 40	AE4	8	243	253	Right-handed alpha
Helix 41	AE5	9	67	99	Right-handed alpha
Helix 42	AE6	9	103	107	Right-handed 310
Helix 43	AE7	9	115	142	Right-handed alpha
Helix 44	AE8	9	159	186	Right-handed alpha
Helix 45	AE9	9	190	201	Right-handed alpha
Helix 46	AF1	9	206	212	Right-handed alpha
Helix 47	AF2	A	26	31	Right-handed alpha
Helix 48	AF3	A	46	55	Right-handed alpha
Helix 49	AF4	A	65	98	Right-handed alpha
Helix 50	AF5	A	100	107	Right-handed alpha
Helix 51	AF6	A	123	128	Right-handed 310
Helix 52	AF7	A	143	151	Right-handed alpha
Helix 53	AF8	A	155	183	Right-handed alpha
Helix 54	AF9	A	187	192	Right-handed alpha
Helix 55	AG1	A	193	203	Right-handed alpha
Helix 56	AG2	A	204	220	Right-handed alpha
Helix 57	AG3	A	220	229	Right-handed alpha
Helix 58	AG4	A	239	246	Right-handed alpha
Helix 59	AG5	A	246	254	Right-handed alpha
Helix 60	AG6	A	255	259	Right-handed 310
Helix 61	AG7	A	261	266	Right-handed alpha
Helix 62	AG8	A	268	273	Right-handed 310
Helix 63	AG9	A	290	309	Right-handed alpha
Helix 64	AH1	A	321	329	Right-handed alpha
Helix 65	AH2	A	340	346	Right-handed alpha
Helix 66	AH3	A	348	374	Right-handed alpha
Helix 67	AH4	A	383	415	Right-handed alpha
Helix 68	AH5	A	425	433	Right-handed alpha
Helix 69	AH6	A	433	465	Right-handed alpha
Helix 70	AH7	A	467	471	Right-handed 310
Helix 71	AH8	A	481	493	Right-handed alpha
Helix 72	AH9	A	529	556	Right-handed alpha
Helix 73	AI1	A	578	582	Right-handed 310
Helix 74	AI2	A	587	618	Right-handed alpha
Helix 75	AI3	A	634	639	Right-handed alpha
Helix 76	AI4	A	641	650	Right-handed alpha
Helix 77	AI5	A	654	659	Right-handed alpha
Helix 78	AI6	A	665	688	Right-handed alpha
Helix 79	AI7	A	690	707	Right-handed alpha
Helix 80	AI8	A	719	750	Right-handed alpha
Helix 81	AI9	B	10	15	Right-handed alpha
Helix 82	AJ1	B	19	28	Right-handed alpha
Helix 83	AJ2	B	31	35	Right-handed 310
Helix 84	AJ3	B	39	73	Right-handed alpha
Helix 85	AJ4	B	74	81	Right-handed alpha
Helix 86	AJ5	B	98	104	Right-handed alpha
Helix 87	AJ6	B	120	128	Right-handed alpha
Helix 88	AJ7	B	132	157	Right-handed alpha
Helix 89	AJ8	B	165	170	Right-handed alpha
Helix 90	AJ9	B	171	183	Right-handed alpha
Helix 91	AK1	B	184	198	Right-handed alpha
Helix 92	AK2	B	198	203	Right-handed alpha
Helix 93	AK3	B	223	228	Right-handed alpha
Helix 94	AK4	B	230	234	Right-handed 310
Helix 95	AK5	B	270	289	Right-handed alpha
Helix 96	AK6	B	301	309	Right-handed alpha
Helix 97	AK7	B	323	330	Right-handed alpha
Helix 98	AK8	B	330	354	Right-handed alpha
Helix 99	AK9	B	365	398	Right-handed alpha
Helix 100	AL1	B	407	415	Right-handed alpha
Helix 101	AL2	B	415	447	Right-handed alpha
Helix 102	AL3	B	449	453	Right-handed 310
Helix 103	AL4	B	458	468	Right-handed alpha
Helix 104	AL5	B	484	489	Right-handed alpha
Helix 105	AL6	B	494	503	Right-handed alpha
Helix 106	AL7	B	514	541	Right-handed alpha
Helix 107	AL8	B	551	555	Right-handed 310
Helix 108	AL9	B	572	605	Right-handed alpha
Helix 109	AM1	B	606	614	Right-handed alpha
Helix 110	AM2	B	616	625	Right-handed alpha
Helix 111	AM3	B	644	667	Right-handed alpha
Helix 112	AM4	B	671	685	Right-handed alpha
Helix 113	AM5	B	702	734	Right-handed alpha
Helix 114	AM6	C	44	48	Right-handed 310
Helix 115	AM7	C	52	58	Right-handed alpha
Helix 116	AM8	D	83	89	Right-handed alpha
Helix 117	AM9	D	125	141	Right-handed alpha
Helix 118	AN1	D	198	202	Right-handed 310
Helix 119	AN2	F	78	95	Right-handed alpha
Helix 120	AN3	F	96	99	Right-handed 310
Helix 121	AN4	F	103	124	Right-handed alpha
Helix 122	AN5	F	143	148	Right-handed alpha
Helix 123	AN6	F	154	181	Right-handed alpha
Helix 124	AN7	F	185	191	Right-handed alpha
Helix 125	AN8	F	193	202	Right-handed alpha
Helix 126	AN9	F	206	218	Right-handed alpha
Helix 127	AO1	F	223	227	Right-handed 310
Helix 128	AO2	G	39	58	Right-handed alpha
Helix 129	AO3	G	58	63	Right-handed alpha
Helix 130	AO4	G	84	89	Right-handed alpha
Helix 131	AO5	G	107	134	Right-handed alpha
Helix 132	AO6	H	47	52	Right-handed alpha
Helix 133	AO7	H	67	79	Right-handed alpha
Helix 134	AO8	H	83	105	Right-handed alpha
Helix 135	AO9	J	2	9	Right-handed alpha
Helix 136	AP1	J	10	33	Right-handed alpha
Helix 137	AP2	L	53	55	Right-handed 310
Helix 138	AP3	L	63	68	Right-handed alpha
Helix 139	AP4	L	68	77	Right-handed alpha
Helix 140	AP5	L	78	82	Right-handed 310
Helix 141	AP6	L	86	109	Right-handed alpha
Helix 142	AP7	L	118	146	Right-handed alpha
Helix 143	AP8	L	166	169	Right-handed 310
Helix 144	AP9	L	170	196	Right-handed alpha
Helix 145	AQ1	O	50	55	Right-handed 310
Helix 146	AQ2	O	58	64	Right-handed alpha
Helix 147	AQ3	O	73	86	Right-handed alpha
Helix 148	AQ4	O	98	127	Right-handed alpha
Helix 149	AQ5	a	64	95	Right-handed alpha
Helix 150	AQ6	a	102	104	Right-handed 310
Helix 151	AQ7	a	105	110	Right-handed alpha
Helix 152	AQ8	a	123	144	Right-handed alpha
Helix 153	AQ9	a	148	152	Right-handed 310
Helix 154	AR1	a	155	159	Right-handed 310
Helix 155	AR2	a	166	198	Right-handed alpha
Helix 156	AR3	a	201	212	Right-handed alpha
Helix 157	AR4	b	62	96	Right-handed alpha
Helix 158	AR5	b	106	113	Right-handed alpha
Helix 159	AR6	b	119	144	Right-handed alpha
Helix 160	AR7	b	156	161	Right-handed 310
Helix 161	AR8	b	170	174	Right-handed 310
Helix 162	AR9	b	182	214	Right-handed alpha
Helix 163	AS1	b	217	228	Right-handed alpha
Helix 164	AS2	b	243	251	Right-handed alpha
Helix 165	AS3	c	75	110	Right-handed alpha
Helix 166	AS4	c	118	125	Right-handed alpha
Helix 167	AS5	c	132	155	Right-handed alpha
Helix 168	AS6	c	191	224	Right-handed alpha
Helix 169	AS7	c	226	237	Right-handed alpha
Helix 170	AS8	I	79	90	Right-handed alpha
Helix 171	AS9	I	90	105	Right-handed alpha
Helix 172	AT1	K	45	64	Right-handed alpha
Helix 173	AT2	K	97	121	Right-handed alpha
Helix 174	AT3	T	173	204	Right-handed alpha
Helix 175	AT4	T	214	220	Right-handed alpha
Helix 176	AT5	T	245	268	Right-handed alpha
Helix 177	AT6	T	280	284	Right-handed 310
Helix 178	AT7	T	308	339	Right-handed alpha
Helix 179	AT8	T	342	352	Right-handed alpha

There are 13 sheets in PDB entry 9MGW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	126	127	first strand
Strand 2	A	17	19	parallel
Strand 3	A	184	186	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	116	first strand
Strand 2	A	136	139	anti-parallel
Strand 3	A	129	130	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	515	517	first strand
Strand 2	A	520	523	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	620	622	first strand
Strand 2	A	627	629	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	91	first strand
Strand 2	B	114	116	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	456	457	first strand
Strand 2	F	136	139	parallel
Strand 3	F	129	130	anti-parallel
Strand 4	F	73	74	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	68	first strand
Strand 2	C	4	8	anti-parallel
Strand 3	D	178	179	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	118	123	first strand
Strand 2	D	91	97	anti-parallel
Strand 3	D	145	149	anti-parallel
Strand 4	D	155	157	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	105	first strand
Strand 2	D	111	113	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	114	first strand
Strand 2	E	97	100	anti-parallel
Strand 3	E	81	88	anti-parallel
Strand 4	E	68	71	anti-parallel
Strand 5	E	119	120	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	50	51	first strand
Strand 2	L	61	62	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	172	173	first strand
Strand 2	c	179	180	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MGW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MGW