Analysis of interatomic Contacts of Structural Units in PDB entry:
9MH0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MH0 entry

There are 18 chains in PDB entry 9MH0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	THR 32	LEU 228
2	ALA 41	ALA 262
3	TYR 112	GLY 319
7	ASP 63	PRO 271
8	SER 28	ASN 253
9	ASN 35	THR 221
A	LYS 12	GLY 751
B	THR 3	PHE 734
C	ALA 2	TYR 81
D	PRO 60	ILE 202
E	GLU 60	PRO 123
F	ASP 68	ARG 232
G	LEU 37	ARG 141
H	LEU 69	SER 133
I	ALA 68	ARG 108
J	MET 1	PHE 41
K	SER 41	LEU 123
L	GLN 47	SER 203

There are152 helices in PDB entry 9MH0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	44	48	Right-handed 310
Helix 2	AA2	1	66	95	Right-handed alpha
Helix 3	AA3	1	102	106	Right-handed 310
Helix 4	AA4	1	107	111	Right-handed 310
Helix 5	AA5	1	123	144	Right-handed alpha
Helix 6	AA6	1	147	153	Right-handed alpha
Helix 7	AA7	1	155	159	Right-handed 310
Helix 8	AA8	1	166	176	Right-handed alpha
Helix 9	AA9	1	178	198	Right-handed alpha
Helix 10	AB1	1	201	212	Right-handed alpha
Helix 11	AB2	2	74	106	Right-handed alpha
Helix 12	AB3	2	112	116	Right-handed 310
Helix 13	AB4	2	121	147	Right-handed alpha
Helix 14	AB5	2	165	192	Right-handed alpha
Helix 15	AB6	2	196	207	Right-handed alpha
Helix 16	AB7	2	212	216	Right-handed 310
Helix 17	AB8	2	218	243	Right-handed alpha
Helix 18	AB9	2	256	260	Right-handed 310
Helix 19	AC1	3	135	166	Right-handed alpha
Helix 20	AC2	3	176	180	Right-handed 310
Helix 21	AC3	3	195	220	Right-handed alpha
Helix 22	AC4	3	222	226	Right-handed 310
Helix 23	AC5	3	246	251	Right-handed alpha
Helix 24	AC6	3	258	291	Right-handed alpha
Helix 25	AC7	3	293	304	Right-handed alpha
Helix 26	AC8	3	309	315	Right-handed alpha
Helix 27	AC9	7	95	130	Right-handed alpha
Helix 28	AD1	7	138	147	Right-handed alpha
Helix 29	AD2	7	152	175	Right-handed alpha
Helix 30	AD3	7	177	181	Right-handed 310
Helix 31	AD4	7	200	204	Right-handed 310
Helix 32	AD5	7	211	244	Right-handed alpha
Helix 33	AD6	7	246	257	Right-handed alpha
Helix 34	AD7	8	62	96	Right-handed alpha
Helix 35	AD8	8	103	113	Right-handed alpha
Helix 36	AD9	8	119	144	Right-handed alpha
Helix 37	AE1	8	146	150	Right-handed 310
Helix 38	AE2	8	156	161	Right-handed 310
Helix 39	AE3	8	170	174	Right-handed 310
Helix 40	AE4	8	182	214	Right-handed alpha
Helix 41	AE5	8	217	228	Right-handed alpha
Helix 42	AE6	8	243	253	Right-handed alpha
Helix 43	AE7	9	67	98	Right-handed alpha
Helix 44	AE8	9	115	139	Right-handed alpha
Helix 45	AE9	9	159	186	Right-handed alpha
Helix 46	AF1	9	190	201	Right-handed alpha
Helix 47	AF2	9	206	213	Right-handed alpha
Helix 48	AF3	A	26	31	Right-handed alpha
Helix 49	AF4	A	46	55	Right-handed alpha
Helix 50	AF5	A	65	98	Right-handed alpha
Helix 51	AF6	A	100	107	Right-handed alpha
Helix 52	AF7	A	123	127	Right-handed 310
Helix 53	AF8	A	143	151	Right-handed alpha
Helix 54	AF9	A	155	183	Right-handed alpha
Helix 55	AG1	A	187	192	Right-handed alpha
Helix 56	AG2	A	193	203	Right-handed alpha
Helix 57	AG3	A	204	220	Right-handed alpha
Helix 58	AG4	A	220	229	Right-handed alpha
Helix 59	AG5	A	239	246	Right-handed alpha
Helix 60	AG6	A	246	254	Right-handed alpha
Helix 61	AG7	A	255	259	Right-handed 310
Helix 62	AG8	A	261	266	Right-handed alpha
Helix 63	AG9	A	268	273	Right-handed 310
Helix 64	AH1	A	290	309	Right-handed alpha
Helix 65	AH2	A	321	329	Right-handed alpha
Helix 66	AH3	A	331	335	Right-handed 310
Helix 67	AH4	A	340	346	Right-handed alpha
Helix 68	AH5	A	348	374	Right-handed alpha
Helix 69	AH6	A	383	415	Right-handed alpha
Helix 70	AH7	A	425	433	Right-handed alpha
Helix 71	AH8	A	433	465	Right-handed alpha
Helix 72	AH9	A	467	471	Right-handed 310
Helix 73	AI1	A	481	493	Right-handed alpha
Helix 74	AI2	A	529	556	Right-handed alpha
Helix 75	AI3	A	587	618	Right-handed alpha
Helix 76	AI4	A	633	639	Right-handed alpha
Helix 77	AI5	A	641	650	Right-handed alpha
Helix 78	AI6	A	654	659	Right-handed alpha
Helix 79	AI7	A	665	688	Right-handed alpha
Helix 80	AI8	A	690	707	Right-handed alpha
Helix 81	AI9	A	719	750	Right-handed alpha
Helix 82	AJ1	B	10	15	Right-handed alpha
Helix 83	AJ2	B	19	28	Right-handed alpha
Helix 84	AJ3	B	31	35	Right-handed 310
Helix 85	AJ4	B	39	73	Right-handed alpha
Helix 86	AJ5	B	74	81	Right-handed alpha
Helix 87	AJ6	B	98	104	Right-handed alpha
Helix 88	AJ7	B	120	128	Right-handed alpha
Helix 89	AJ8	B	132	157	Right-handed alpha
Helix 90	AJ9	B	165	170	Right-handed alpha
Helix 91	AK1	B	171	182	Right-handed alpha
Helix 92	AK2	B	184	198	Right-handed alpha
Helix 93	AK3	B	198	203	Right-handed alpha
Helix 94	AK4	B	223	228	Right-handed alpha
Helix 95	AK5	B	230	234	Right-handed 310
Helix 96	AK6	B	270	289	Right-handed alpha
Helix 97	AK7	B	301	309	Right-handed alpha
Helix 98	AK8	B	311	315	Right-handed 310
Helix 99	AK9	B	322	330	Right-handed alpha
Helix 100	AL1	B	330	354	Right-handed alpha
Helix 101	AL2	B	365	398	Right-handed alpha
Helix 102	AL3	B	407	415	Right-handed alpha
Helix 103	AL4	B	415	447	Right-handed alpha
Helix 104	AL5	B	449	453	Right-handed 310
Helix 105	AL6	B	458	468	Right-handed alpha
Helix 106	AL7	B	484	489	Right-handed alpha
Helix 107	AL8	B	494	503	Right-handed alpha
Helix 108	AL9	B	514	541	Right-handed alpha
Helix 109	AM1	B	550	555	Right-handed 310
Helix 110	AM2	B	572	605	Right-handed alpha
Helix 111	AM3	B	606	614	Right-handed alpha
Helix 112	AM4	B	616	625	Right-handed alpha
Helix 113	AM5	B	629	634	Right-handed alpha
Helix 114	AM6	B	644	667	Right-handed alpha
Helix 115	AM7	B	670	685	Right-handed alpha
Helix 116	AM8	B	702	734	Right-handed alpha
Helix 117	AM9	C	44	48	Right-handed 310
Helix 118	AN1	C	52	58	Right-handed alpha
Helix 119	AN2	D	84	89	Right-handed alpha
Helix 120	AN3	D	125	141	Right-handed alpha
Helix 121	AN4	D	198	202	Right-handed 310
Helix 122	AN5	E	115	117	Right-handed 310
Helix 123	AN6	F	78	95	Right-handed alpha
Helix 124	AN7	F	96	99	Right-handed 310
Helix 125	AN8	F	103	124	Right-handed alpha
Helix 126	AN9	F	143	148	Right-handed alpha
Helix 127	AO1	F	154	181	Right-handed alpha
Helix 128	AO2	F	184	188	Right-handed 310
Helix 129	AO3	F	193	202	Right-handed alpha
Helix 130	AO4	F	206	218	Right-handed alpha
Helix 131	AO5	F	223	227	Right-handed 310
Helix 132	AO6	G	39	58	Right-handed alpha
Helix 133	AO7	G	64	69	Right-handed alpha
Helix 134	AO8	G	84	89	Right-handed alpha
Helix 135	AO9	G	107	134	Right-handed alpha
Helix 136	AP1	H	70	80	Right-handed alpha
Helix 137	AP2	H	83	105	Right-handed alpha
Helix 138	AP3	I	79	90	Right-handed alpha
Helix 139	AP4	I	90	105	Right-handed alpha
Helix 140	AP5	J	2	8	Right-handed alpha
Helix 141	AP6	J	11	16	Right-handed alpha
Helix 142	AP7	J	16	33	Right-handed alpha
Helix 143	AP8	K	45	64	Right-handed alpha
Helix 144	AP9	K	95	120	Right-handed alpha
Helix 145	AQ1	L	51	55	Right-handed 310
Helix 146	AQ2	L	63	68	Right-handed alpha
Helix 147	AQ3	L	68	77	Right-handed alpha
Helix 148	AQ4	L	78	82	Right-handed 310
Helix 149	AQ5	L	86	109	Right-handed alpha
Helix 150	AQ6	L	118	146	Right-handed alpha
Helix 151	AQ7	L	166	169	Right-handed 310
Helix 152	AQ8	L	170	195	Right-handed alpha

There are 12 sheets in PDB entry 9MH0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	114	115	first strand
Strand 2	1	118	119	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	126	127	first strand
Strand 2	A	17	19	parallel
Strand 3	A	184	186	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	130	first strand
Strand 2	A	136	137	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	515	517	first strand
Strand 2	A	520	523	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	620	622	first strand
Strand 2	A	627	629	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	91	first strand
Strand 2	B	114	116	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	456	457	first strand
Strand 2	F	136	139	parallel
Strand 3	F	129	130	anti-parallel
Strand 4	F	73	74	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	68	first strand
Strand 2	C	4	8	anti-parallel
Strand 3	D	178	179	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	123	first strand
Strand 2	D	91	98	anti-parallel
Strand 3	D	145	149	anti-parallel
Strand 4	D	155	157	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	105	first strand
Strand 2	D	111	113	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	114	first strand
Strand 2	E	97	100	anti-parallel
Strand 3	E	81	88	anti-parallel
Strand 4	E	68	71	anti-parallel
Strand 5	E	119	120	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MH0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MH0