Analysis of interatomic Contacts of Structural Units in PDB entry:
9MH1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MH1 entry

There are 18 chains in PDB entry 9MH1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	GLN 32	VAL 228
3	LEU 58	LYS 283
7	ALA 39	PHE 255
8	ASN 28	SER 253
9	ASN 35	THR 221
A	LYS 12	GLY 751
B	ALA 2	GLY 735
C	ALA 2	TYR 81
D	PRO 51	ILE 193
E	LYS 43	ALA 110
F	ASP 63	ARG 227
G	MET 37	ARG 141
H	GLU 70	GLY 116
I	PHE 74	LYS 108
J	MET 1	PHE 41
K	GLY 41	LEU 123
L	MET 56	VAL 193
2	ALA 39	ALA 260

There are146 helices in PDB entry 9MH1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	64	95	Right-handed alpha
Helix 2	AA2	1	104	110	Right-handed alpha
Helix 3	AA3	1	124	144	Right-handed alpha
Helix 4	AA4	1	147	153	Right-handed alpha
Helix 5	AA5	1	155	159	Right-handed 310
Helix 6	AA6	1	166	198	Right-handed alpha
Helix 7	AA7	1	201	212	Right-handed alpha
Helix 8	AA8	1	217	221	Right-handed 310
Helix 9	AA9	3	101	132	Right-handed alpha
Helix 10	AB1	3	136	140	Right-handed 310
Helix 11	AB2	3	142	146	Right-handed 310
Helix 12	AB3	3	161	186	Right-handed alpha
Helix 13	AB4	3	188	192	Right-handed 310
Helix 14	AB5	3	198	203	Right-handed 310
Helix 15	AB6	3	212	217	Right-handed alpha
Helix 16	AB7	3	224	257	Right-handed alpha
Helix 17	AB8	3	259	270	Right-handed alpha
Helix 18	AB9	3	275	280	Right-handed alpha
Helix 19	AC1	7	74	109	Right-handed alpha
Helix 20	AC2	7	117	126	Right-handed alpha
Helix 21	AC3	7	131	154	Right-handed alpha
Helix 22	AC4	7	179	183	Right-handed 310
Helix 23	AC5	7	190	223	Right-handed alpha
Helix 24	AC6	7	225	236	Right-handed alpha
Helix 25	AC7	8	40	45	Right-handed alpha
Helix 26	AC8	8	62	97	Right-handed alpha
Helix 27	AC9	8	103	113	Right-handed alpha
Helix 28	AD1	8	119	144	Right-handed alpha
Helix 29	AD2	8	146	150	Right-handed 310
Helix 30	AD3	8	157	161	Right-handed 310
Helix 31	AD4	8	170	174	Right-handed 310
Helix 32	AD5	8	182	215	Right-handed alpha
Helix 33	AD6	8	217	228	Right-handed alpha
Helix 34	AD7	8	243	253	Right-handed alpha
Helix 35	AD8	9	69	99	Right-handed alpha
Helix 36	AD9	9	106	110	Right-handed 310
Helix 37	AE1	9	119	141	Right-handed alpha
Helix 38	AE2	9	159	186	Right-handed alpha
Helix 39	AE3	9	190	201	Right-handed alpha
Helix 40	AE4	9	206	213	Right-handed alpha
Helix 41	AE5	9	213	219	Right-handed alpha
Helix 42	AE6	A	26	31	Right-handed alpha
Helix 43	AE7	A	45	53	Right-handed alpha
Helix 44	AE8	A	58	63	Right-handed alpha
Helix 45	AE9	A	65	97	Right-handed alpha
Helix 46	AF1	A	100	107	Right-handed alpha
Helix 47	AF2	A	123	128	Right-handed 310
Helix 48	AF3	A	143	151	Right-handed alpha
Helix 49	AF4	A	155	183	Right-handed alpha
Helix 50	AF5	A	187	192	Right-handed alpha
Helix 51	AF6	A	193	204	Right-handed alpha
Helix 52	AF7	A	206	220	Right-handed alpha
Helix 53	AF8	A	220	231	Right-handed alpha
Helix 54	AF9	A	239	246	Right-handed alpha
Helix 55	AG1	A	246	254	Right-handed alpha
Helix 56	AG2	A	255	259	Right-handed 310
Helix 57	AG3	A	261	266	Right-handed alpha
Helix 58	AG4	A	268	275	Right-handed 310
Helix 59	AG5	A	290	309	Right-handed alpha
Helix 60	AG6	A	321	329	Right-handed alpha
Helix 61	AG7	A	340	346	Right-handed alpha
Helix 62	AG8	A	348	374	Right-handed alpha
Helix 63	AG9	A	383	416	Right-handed alpha
Helix 64	AH1	A	425	433	Right-handed alpha
Helix 65	AH2	A	433	465	Right-handed alpha
Helix 66	AH3	A	467	471	Right-handed 310
Helix 67	AH4	A	481	493	Right-handed alpha
Helix 68	AH5	A	529	556	Right-handed alpha
Helix 69	AH6	A	587	618	Right-handed alpha
Helix 70	AH7	A	634	639	Right-handed alpha
Helix 71	AH8	A	641	648	Right-handed alpha
Helix 72	AH9	A	654	659	Right-handed alpha
Helix 73	AI1	A	665	682	Right-handed alpha
Helix 74	AI2	A	682	687	Right-handed alpha
Helix 75	AI3	A	690	707	Right-handed alpha
Helix 76	AI4	A	719	750	Right-handed alpha
Helix 77	AI5	B	10	15	Right-handed alpha
Helix 78	AI6	B	19	28	Right-handed alpha
Helix 79	AI7	B	31	35	Right-handed 310
Helix 80	AI8	B	39	71	Right-handed alpha
Helix 81	AI9	B	74	81	Right-handed alpha
Helix 82	AJ1	B	98	105	Right-handed alpha
Helix 83	AJ2	B	120	129	Right-handed alpha
Helix 84	AJ3	B	132	157	Right-handed alpha
Helix 85	AJ4	B	165	170	Right-handed alpha
Helix 86	AJ5	B	171	182	Right-handed alpha
Helix 87	AJ6	B	184	198	Right-handed alpha
Helix 88	AJ7	B	198	204	Right-handed alpha
Helix 89	AJ8	B	223	229	Right-handed alpha
Helix 90	AJ9	B	230	234	Right-handed 310
Helix 91	AK1	B	270	289	Right-handed alpha
Helix 92	AK2	B	301	309	Right-handed alpha
Helix 93	AK3	B	311	315	Right-handed 310
Helix 94	AK4	B	322	330	Right-handed alpha
Helix 95	AK5	B	330	354	Right-handed alpha
Helix 96	AK6	B	365	398	Right-handed alpha
Helix 97	AK7	B	407	415	Right-handed alpha
Helix 98	AK8	B	415	447	Right-handed alpha
Helix 99	AK9	B	449	453	Right-handed 310
Helix 100	AL1	B	458	468	Right-handed alpha
Helix 101	AL2	B	484	489	Right-handed alpha
Helix 102	AL3	B	494	504	Right-handed alpha
Helix 103	AL4	B	514	541	Right-handed alpha
Helix 104	AL5	B	563	567	Right-handed 310
Helix 105	AL6	B	572	605	Right-handed alpha
Helix 106	AL7	B	606	614	Right-handed alpha
Helix 107	AL8	B	616	624	Right-handed alpha
Helix 108	AL9	B	629	634	Right-handed alpha
Helix 109	AM1	B	644	667	Right-handed alpha
Helix 110	AM2	B	669	685	Right-handed alpha
Helix 111	AM3	B	702	733	Right-handed alpha
Helix 112	AM4	C	15	21	Right-handed alpha
Helix 113	AM5	C	44	48	Right-handed 310
Helix 114	AM6	C	52	57	Right-handed alpha
Helix 115	AM7	D	75	80	Right-handed alpha
Helix 116	AM8	D	116	131	Right-handed alpha
Helix 117	AM9	F	63	67	Right-handed 310
Helix 118	AN1	F	74	92	Right-handed alpha
Helix 119	AN2	F	98	119	Right-handed alpha
Helix 120	AN3	F	138	143	Right-handed alpha
Helix 121	AN4	F	145	175	Right-handed alpha
Helix 122	AN5	F	179	186	Right-handed alpha
Helix 123	AN6	F	188	197	Right-handed alpha
Helix 124	AN7	F	201	213	Right-handed alpha
Helix 125	AN8	F	218	222	Right-handed 310
Helix 126	AN9	G	39	58	Right-handed alpha
Helix 127	AO1	G	58	63	Right-handed alpha
Helix 128	AO2	G	84	91	Right-handed alpha
Helix 129	AO3	G	107	134	Right-handed alpha
Helix 130	AO4	H	82	101	Right-handed alpha
Helix 131	AO5	I	79	105	Right-handed alpha
Helix 132	AO6	J	2	9	Right-handed alpha
Helix 133	AO7	J	10	33	Right-handed alpha
Helix 134	AO8	K	45	64	Right-handed alpha
Helix 135	AO9	K	95	120	Right-handed alpha
Helix 136	AP1	L	64	73	Right-handed alpha
Helix 137	AP2	L	82	105	Right-handed alpha
Helix 138	AP3	L	113	142	Right-handed alpha
Helix 139	AP4	L	161	164	Right-handed 310
Helix 140	AP5	L	165	193	Right-handed alpha
Helix 141	AP6	2	72	104	Right-handed alpha
Helix 142	AP7	2	110	114	Right-handed 310
Helix 143	AP8	2	119	145	Right-handed alpha
Helix 144	AP9	2	163	188	Right-handed alpha
Helix 145	AQ1	2	194	205	Right-handed alpha
Helix 146	AQ2	2	216	241	Right-handed alpha

There are 11 sheets in PDB entry 9MH1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	92	93	first strand
Strand 2	A	17	19	parallel
Strand 3	A	184	186	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	116	first strand
Strand 2	A	136	139	anti-parallel
Strand 3	A	129	130	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	515	517	first strand
Strand 2	A	520	523	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	620	622	first strand
Strand 2	A	627	629	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	91	first strand
Strand 2	B	114	116	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	65	68	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	114	first strand
Strand 2	D	82	89	anti-parallel
Strand 3	D	136	140	anti-parallel
Strand 4	D	146	148	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	96	first strand
Strand 2	D	102	105	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	100	first strand
Strand 2	E	83	86	anti-parallel
Strand 3	E	68	74	anti-parallel
Strand 4	E	54	57	anti-parallel
Strand 5	E	105	106	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	69	first strand
Strand 2	F	124	125	anti-parallel
Strand 3	F	131	132	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MH1

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MH1