Analysis of interatomic Contacts of Structural Units in PDB entry:
9MHG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MHG entry

There are 5 chains in PDB entry 9MHG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	LYS 1358
B	GLU 5	LYS 887
C	ALA 56	GLU 406
D	GLU 138	LYS 450
E	MET 1	MET 176

There are110 helices in PDB entry 9MHG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	7	Right-handed alpha
Helix 2	AA2	A	9	15	Right-handed alpha
Helix 3	AA3	A	16	23	Right-handed alpha
Helix 4	AA4	A	63	79	Right-handed alpha
Helix 5	AA5	A	110	114	Right-handed alpha
Helix 6	AA6	A	121	143	Right-handed alpha
Helix 7	AA7	A	180	187	Right-handed alpha
Helix 8	AA8	A	198	200	Right-handed 310
Helix 9	AA9	A	204	208	Right-handed 310
Helix 10	AB1	A	228	228	Right-handed 310
Helix 11	AB2	A	229	233	Right-handed alpha
Helix 12	AB3	A	236	254	Right-handed alpha
Helix 13	AB4	A	260	269	Right-handed alpha
Helix 14	AB5	A	274	279	Right-handed alpha
Helix 15	AB6	A	283	294	Right-handed alpha
Helix 16	AB7	A	297	301	Right-handed 310
Helix 17	AB8	A	303	312	Right-handed alpha
Helix 18	AB9	A	317	323	Right-handed alpha
Helix 19	AC1	A	323	333	Right-handed alpha
Helix 20	AC2	A	338	358	Right-handed alpha
Helix 21	AC3	A	374	384	Right-handed alpha
Helix 22	AC4	A	391	406	Right-handed alpha
Helix 23	AC5	A	410	417	Right-handed alpha
Helix 24	AC6	A	417	426	Right-handed alpha
Helix 25	AC7	A	430	446	Right-handed alpha
Helix 26	AC8	A	457	462	Right-handed alpha
Helix 27	AC9	A	462	468	Right-handed alpha
Helix 28	AD1	A	469	473	Right-handed 310
Helix 29	AD2	A	475	508	Right-handed alpha
Helix 30	AD3	A	525	546	Right-handed alpha
Helix 31	AD4	A	549	576	Right-handed alpha
Helix 32	AD5	A	576	585	Right-handed alpha
Helix 33	AD6	A	590	609	Right-handed alpha
Helix 34	AD7	A	611	624	Right-handed alpha
Helix 35	AD8	A	628	645	Right-handed alpha
Helix 36	AD9	A	649	661	Right-handed alpha
Helix 37	AE1	A	662	666	Right-handed 310
Helix 38	AE2	A	668	686	Right-handed alpha
Helix 39	AE3	A	687	694	Right-handed alpha
Helix 40	AE4	A	695	700	Right-handed alpha
Helix 41	AE5	A	712	719	Right-handed alpha
Helix 42	AE6	A	725	734	Right-handed alpha
Helix 43	AE7	A	737	753	Right-handed alpha
Helix 44	AE8	A	764	777	Right-handed alpha
Helix 45	AE9	A	780	790	Right-handed alpha
Helix 46	AF1	A	790	806	Right-handed alpha
Helix 47	AF2	A	807	812	Right-handed 310
Helix 48	AF3	A	939	968	Right-handed alpha
Helix 49	AF4	A	1023	1025	Right-handed 310
Helix 50	AF5	A	1138	1142	Right-handed 310
Helix 51	AF6	A	1272	1276	Right-handed 310
Helix 52	AF7	B	34	41	Right-handed alpha
Helix 53	AF8	B	42	46	Right-handed 310
Helix 54	AF9	B	47	52	Right-handed alpha
Helix 55	AG1	B	98	100	Right-handed 310
Helix 56	AG2	B	170	184	Right-handed alpha
Helix 57	AG3	B	190	212	Right-handed alpha
Helix 58	AG4	B	264	275	Right-handed alpha
Helix 59	AG5	B	276	280	Right-handed 310
Helix 60	AG6	B	281	285	Right-handed 310
Helix 61	AG7	B	289	301	Right-handed alpha
Helix 62	AG8	B	309	319	Right-handed alpha
Helix 63	AG9	B	319	324	Right-handed alpha
Helix 64	AH1	B	325	327	Right-handed 310
Helix 65	AH2	B	328	337	Right-handed alpha
Helix 66	AH3	B	341	353	Right-handed alpha
Helix 67	AH4	B	359	368	Right-handed alpha
Helix 68	AH5	B	373	385	Right-handed alpha
Helix 69	AH6	B	388	395	Right-handed alpha
Helix 70	AH7	B	395	403	Right-handed alpha
Helix 71	AH8	B	404	406	Right-handed 310
Helix 72	AH9	B	407	413	Right-handed alpha
Helix 73	AI1	B	474	486	Right-handed alpha
Helix 74	AI2	B	486	503	Right-handed alpha
Helix 75	AI3	B	505	510	Right-handed alpha
Helix 76	AI4	B	510	530	Right-handed alpha
Helix 77	AI5	B	532	560	Right-handed alpha
Helix 78	AI6	B	565	578	Right-handed alpha
Helix 79	AI7	B	641	661	Right-handed alpha
Helix 80	AI8	B	690	697	Right-handed alpha
Helix 81	AI9	B	699	708	Right-handed alpha
Helix 82	AJ1	B	718	739	Right-handed alpha
Helix 83	AJ2	B	745	747	Right-handed 310
Helix 84	AJ3	B	780	787	Right-handed alpha
Helix 85	AJ4	B	792	811	Right-handed alpha
Helix 86	AJ5	B	812	822	Right-handed alpha
Helix 87	AJ6	B	828	833	Right-handed alpha
Helix 88	AJ7	B	834	846	Right-handed alpha
Helix 89	AJ8	B	851	867	Right-handed alpha
Helix 90	AJ9	B	870	885	Right-handed alpha
Helix 91	AK1	C	57	62	Right-handed alpha
Helix 92	AK2	C	74	205	Right-handed alpha
Helix 93	AK3	C	276	289	Right-handed alpha
Helix 94	AK4	C	298	322	Right-handed alpha
Helix 95	AK5	C	330	335	Right-handed 310
Helix 96	AK6	C	340	362	Right-handed alpha
Helix 97	AK7	C	373	383	Right-handed alpha
Helix 98	AK8	C	398	406	Right-handed alpha
Helix 99	AK9	D	139	173	Right-handed alpha
Helix 100	AL1	D	177	266	Right-handed alpha
Helix 101	AL2	D	268	274	Right-handed alpha
Helix 102	AL3	D	299	322	Right-handed alpha
Helix 103	AL4	D	365	385	Right-handed alpha
Helix 104	AL5	D	421	446	Right-handed alpha
Helix 105	AL6	E	23	34	Right-handed alpha
Helix 106	AL7	E	70	74	Right-handed 310
Helix 107	AL8	E	95	101	Right-handed alpha
Helix 108	AL9	E	101	113	Right-handed alpha
Helix 109	AM1	E	135	146	Right-handed alpha
Helix 110	AM2	E	160	176	Right-handed alpha

There are 22 sheets in PDB entry 9MHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	34	first strand
Strand 2	A	39	45	anti-parallel
Strand 3	A	48	56	anti-parallel
Strand 4	A	98	104	anti-parallel
Strand 5	A	89	95	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	162	165	parallel
Strand 3	A	154	156	anti-parallel
Strand 4	A	108	109	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	176	first strand
Strand 2	A	202	203	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	829	832	first strand
Strand 2	B	6	11	anti-parallel
Strand 3	B	232	234	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	984	989	first strand
Strand 2	A	1354	1358	anti-parallel
Strand 3	A	1344	1349	anti-parallel
Strand 4	A	1332	1338	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	996	1001	first strand
Strand 2	A	1007	1012	anti-parallel
Strand 3	A	1017	1021	anti-parallel
Strand 4	A	1036	1038	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1045	1050	first strand
Strand 2	A	1056	1061	anti-parallel
Strand 3	A	1065	1072	anti-parallel
Strand 4	A	1081	1089	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1098	1105	first strand
Strand 2	A	1110	1116	anti-parallel
Strand 3	A	1120	1125	anti-parallel
Strand 4	A	1131	1136	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1144	1149	first strand
Strand 2	A	1155	1160	anti-parallel
Strand 3	A	1164	1169	anti-parallel
Strand 4	A	1174	1180	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1187	1192	first strand
Strand 2	A	1199	1204	anti-parallel
Strand 3	A	1210	1214	anti-parallel
Strand 4	A	1220	1225	anti-parallel
Strand 5	A	1299	1302	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1242	1248	first strand
Strand 2	A	1255	1260	anti-parallel
Strand 3	A	1266	1269	anti-parallel
Strand 4	A	1277	1278	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	69	first strand
Strand 2	B	58	65	anti-parallel
Strand 3	B	74	75	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	69	first strand
Strand 2	B	58	65	anti-parallel
Strand 3	B	104	113	anti-parallel
Strand 4	B	119	128	anti-parallel
Strand 5	B	140	147	anti-parallel
Strand 6	B	215	221	anti-parallel
Strand 7	B	18	27	anti-parallel
Strand 8	B	85	96	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	225	226	first strand
Strand 2	B	229	230	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	591	592	first strand
Strand 2	B	600	604	anti-parallel
Strand 3	B	619	625	anti-parallel
Strand 4	B	610	611	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	591	592	first strand
Strand 2	B	600	604	anti-parallel
Strand 3	B	619	625	anti-parallel
Strand 4	B	630	637	anti-parallel
Strand 5	B	679	683	anti-parallel
Strand 6	B	672	676	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	688	689	first strand
Strand 2	B	749	751	anti-parallel
Strand 3	B	757	759	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	210	first strand
Strand 2	C	260	263	anti-parallel
Strand 3	C	269	271	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	276	279	first strand
Strand 2	D	282	285	anti-parallel
Strand 3	D	288	290	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	328	331	first strand
Strand 2	D	338	341	anti-parallel
Strand 3	D	349	350	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	395	397	first strand
Strand 2	D	402	404	anti-parallel
Strand 3	D	412	414	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	55	first strand
Strand 2	E	58	67	anti-parallel
Strand 3	E	10	17	parallel
Strand 4	E	86	92	parallel
Strand 5	E	118	124	parallel
Strand 6	E	150	152	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MHG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MHG