Analysis of interatomic Contacts of Structural Units in PDB entry:
9MHO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MHO entry

There are 2 chains in PDB entry 9MHO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 19HIS 265
B
 MSE 19GLY 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 9MHO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 60Right-handed 310
Helix 2
AA2
A
165 169Right-handed 310
Helix 3
AA3
B
52 60Right-handed 310
Helix 4
AA4
B
165 169Right-handed 310
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There are 8 sheets in PDB entry 9MHO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 27first strand
Strand 2
A
37 43anti-parallel
Strand 3
A
83 85anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
64 67anti-parallel
Strand 3
A
93 108anti-parallel
Strand 4
A
126 140anti-parallel
Strand 5
A
252 263parallel
Strand 6
A
232 243anti-parallel
Strand 7
A
190 195anti-parallel
Strand 8
A
214 217anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
175 181anti-parallel
Strand 3
A
184 185anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 162first strand
Strand 2
A
175 181anti-parallel
Strand 3
A
223 226anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 27first strand
Strand 2
B
37 43anti-parallel
Strand 3
B
83 85anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 73first strand
Strand 2
B
64 67anti-parallel
Strand 3
B
93 108anti-parallel
Strand 4
B
126 140anti-parallel
Strand 5
B
252 263parallel
Strand 6
B
232 243anti-parallel
Strand 7
B
190 195anti-parallel
Strand 8
B
214 217anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 162first strand
Strand 2
B
175 181anti-parallel
Strand 3
B
184 185anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 162first strand
Strand 2
B
175 181anti-parallel
Strand 3
B
223 226anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il