Analysis of interatomic Contacts of Structural Units in PDB entry:
9MHS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MHS entry

There are 2 chains in PDB entry 9MHS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 11SER 526
A
 SER 21SER 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 9MHS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
16 25Right-handed alpha
Helix 2
AA2
B
55 62Right-handed alpha
Helix 3
AA3
B
62 70Right-handed alpha
Helix 4
AA4
B
74 86Right-handed alpha
Helix 5
AA5
B
89 103Right-handed alpha
Helix 6
AA6
B
107 120Right-handed alpha
Helix 7
AA7
B
131 142Right-handed alpha
Helix 8
AA8
B
144 148Right-handed 310
Helix 9
AA9
B
154 158Right-handed alpha
Helix 10
AB1
B
163 174Right-handed alpha
Helix 11
AB2
B
177 179Right-handed 310
Helix 12
AB3
B
187 197Right-handed alpha
Helix 13
AB4
B
227 247Right-handed alpha
Helix 14
AB5
B
270 280Right-handed alpha
Helix 15
AB6
B
284 298Right-handed alpha
Helix 16
AB7
B
310 314Right-handed 310
Helix 17
AB8
B
321 335Right-handed alpha
Helix 18
AB9
B
339 352Right-handed alpha
Helix 19
AC1
B
372 387Right-handed alpha
Helix 20
AC2
B
391 393Right-handed 310
Helix 21
AC3
B
394 407Right-handed alpha
Helix 22
AC4
B
408 413Right-handed 310
Helix 23
AC5
B
419 434Right-handed alpha
Helix 24
AC6
B
438 440Right-handed 310
Helix 25
AC7
B
441 452Right-handed alpha
Helix 26
AC8
B
458 472Right-handed alpha
Helix 27
AC9
B
476 485Right-handed alpha
Helix 28
AD1
B
510 525Right-handed alpha
Helix 29
AD2
A
23 27Right-handed 310
Helix 30
AD3
A
56 61Right-handed alpha
Helix 31
AD4
A
62 70Right-handed alpha
Helix 32
AD5
A
74 86Right-handed alpha
Helix 33
AD6
A
89 103Right-handed alpha
Helix 34
AD7
A
107 120Right-handed alpha
Helix 35
AD8
A
131 142Right-handed alpha
Helix 36
AD9
A
144 148Right-handed 310
Helix 37
AE1
A
154 158Right-handed alpha
Helix 38
AE2
A
163 175Right-handed alpha
Helix 39
AE3
A
177 179Right-handed 310
Helix 40
AE4
A
187 197Right-handed alpha
Helix 41
AE5
A
227 247Right-handed alpha
Helix 42
AE6
A
270 280Right-handed alpha
Helix 43
AE7
A
284 297Right-handed alpha
Helix 44
AE8
A
310 314Right-handed 310
Helix 45
AE9
A
321 335Right-handed alpha
Helix 46
AF1
A
339 352Right-handed alpha
Helix 47
AF2
A
372 387Right-handed alpha
Helix 48
AF3
A
391 393Right-handed 310
Helix 49
AF4
A
394 407Right-handed alpha
Helix 50
AF5
A
408 413Right-handed 310
Helix 51
AF6
A
419 434Right-handed alpha
Helix 52
AF7
A
438 440Right-handed 310
Helix 53
AF8
A
441 453Right-handed alpha
Helix 54
AF9
A
458 472Right-handed alpha
Helix 55
AG1
A
476 486Right-handed alpha
Helix 56
AG2
A
502 505Right-handed 310
Helix 57
AG3
A
510 525Right-handed alpha
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There are 8 sheets in PDB entry 9MHS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 14first strand
Strand 2
B
209 212anti-parallel
Strand 3
B
200 204anti-parallel
Strand 4
B
181 185parallel
Strand 5
B
29 32parallel
Strand 6
B
123 128parallel
Strand 7
B
150 153parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 40first strand
Strand 2
B
105 106anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 265first strand
Strand 2
B
253 255anti-parallel
Strand 3
B
506 509anti-parallel
Strand 4
B
497 501anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 302first strand
Strand 2
B
305 306anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 153first strand
Strand 2
A
123 128parallel
Strand 3
A
29 32parallel
Strand 4
A
181 185parallel
Strand 5
A
200 203parallel
Strand 6
A
210 212anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
105 106anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 265first strand
Strand 2
A
253 255anti-parallel
Strand 3
A
506 509anti-parallel
Strand 4
A
497 501anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
305 306anti-parallel
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