Analysis of interatomic Contacts of Structural Units in PDB entry:
9MIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MIX entry

There are 2 chains in PDB entry 9MIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 471GLU 1048
B
 HIS 471GLU 1048
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9MIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
473 477Right-handed 310
Helix 2
AA2
A
483 494Right-handed alpha
Helix 3
AA3
A
498 503Right-handed alpha
Helix 4
AA4
A
506 535Right-handed alpha
Helix 5
AA5
A
540 558Right-handed alpha
Helix 6
AA6
A
570 586Right-handed alpha
Helix 7
AA7
A
590 611Right-handed alpha
Helix 8
AA8
A
612 620Right-handed 310
Helix 9
AA9
A
621 651Right-handed alpha
Helix 10
AB1
A
658 665Right-handed 310
Helix 11
AB2
A
676 687Right-handed alpha
Helix 12
AB3
A
694 698Right-handed 310
Helix 13
AB4
A
699 706Right-handed alpha
Helix 14
AB5
A
725 745Right-handed alpha
Helix 15
AB6
A
753 763Right-handed alpha
Helix 16
AB7
A
763 780Right-handed alpha
Helix 17
AB8
A
811 817Right-handed alpha
Helix 18
AB9
A
817 840Right-handed alpha
Helix 19
AC1
A
841 845Right-handed 310
Helix 20
AC2
A
853 870Right-handed alpha
Helix 21
AC3
A
878 888Right-handed alpha
Helix 22
AC4
A
911 923Right-handed alpha
Helix 23
AC5
A
926 931Right-handed alpha
Helix 24
AC6
A
934 949Right-handed alpha
Helix 25
AC7
A
953 961Right-handed alpha
Helix 26
AC8
A
972 976Right-handed 310
Helix 27
AC9
A
979 1003Right-handed alpha
Helix 28
AD1
A
1005 1009Right-handed 310
Helix 29
AD2
A
1012 1024Right-handed alpha
Helix 30
AD3
A
1028 1036Right-handed alpha
Helix 31
AD4
A
1040 1048Right-handed alpha
Helix 32
AD5
B
473 477Right-handed 310
Helix 33
AD6
B
483 494Right-handed alpha
Helix 34
AD7
B
498 503Right-handed alpha
Helix 35
AD8
B
506 535Right-handed alpha
Helix 36
AD9
B
540 558Right-handed alpha
Helix 37
AE1
B
570 586Right-handed alpha
Helix 38
AE2
B
590 611Right-handed alpha
Helix 39
AE3
B
613 620Right-handed 310
Helix 40
AE4
B
621 651Right-handed alpha
Helix 41
AE5
B
658 665Right-handed 310
Helix 42
AE6
B
676 687Right-handed alpha
Helix 43
AE7
B
694 698Right-handed 310
Helix 44
AE8
B
699 706Right-handed alpha
Helix 45
AE9
B
725 745Right-handed alpha
Helix 46
AF1
B
753 763Right-handed alpha
Helix 47
AF2
B
763 780Right-handed alpha
Helix 48
AF3
B
811 817Right-handed alpha
Helix 49
AF4
B
817 840Right-handed alpha
Helix 50
AF5
B
841 845Right-handed 310
Helix 51
AF6
B
853 870Right-handed alpha
Helix 52
AF7
B
878 888Right-handed alpha
Helix 53
AF8
B
911 923Right-handed alpha
Helix 54
AF9
B
926 931Right-handed alpha
Helix 55
AG1
B
934 949Right-handed alpha
Helix 56
AG2
B
953 961Right-handed alpha
Helix 57
AG3
B
972 976Right-handed 310
Helix 58
AG4
B
979 1003Right-handed alpha
Helix 59
AG5
B
1005 1009Right-handed 310
Helix 60
AG6
B
1012 1024Right-handed alpha
Helix 61
AG7
B
1028 1036Right-handed alpha
Helix 62
AG8
B
1040 1048Right-handed alpha
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There are 6 sheets in PDB entry 9MIX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 567first strand
Strand 2
A
875 876anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 670first strand
Strand 2
A
709 712anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
889 890first strand
Strand 2
A
905 906anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
566 567first strand
Strand 2
B
875 876anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
667 670first strand
Strand 2
B
709 712anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
889 890first strand
Strand 2
B
905 906anti-parallel
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