Analysis of interatomic Contacts of Structural Units in PDB entry:
9MJO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MJO entry

There are 2 chains in PDB entry 9MJO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 476LYS 1045
A
 LEU 476LYS 1045
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 9MJO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
483 494Right-handed alpha
Helix 2
AA2
B
498 503Right-handed alpha
Helix 3
AA3
B
506 535Right-handed alpha
Helix 4
AA4
B
540 559Right-handed alpha
Helix 5
AA5
B
569 587Right-handed alpha
Helix 6
AA6
B
589 611Right-handed alpha
Helix 7
AA7
B
612 620Right-handed 310
Helix 8
AA8
B
621 651Right-handed alpha
Helix 9
AA9
B
658 665Right-handed 310
Helix 10
AB1
B
699 706Right-handed alpha
Helix 11
AB2
B
724 746Right-handed alpha
Helix 12
AB3
B
747 749Right-handed 310
Helix 13
AB4
B
753 763Right-handed alpha
Helix 14
AB5
B
763 780Right-handed alpha
Helix 15
AB6
B
811 817Right-handed alpha
Helix 16
AB7
B
817 840Right-handed alpha
Helix 17
AB8
B
841 845Right-handed 310
Helix 18
AB9
B
851 869Right-handed alpha
Helix 19
AC1
B
877 887Right-handed alpha
Helix 20
AC2
B
911 923Right-handed alpha
Helix 21
AC3
B
926 931Right-handed alpha
Helix 22
AC4
B
934 949Right-handed alpha
Helix 23
AC5
B
953 961Right-handed alpha
Helix 24
AC6
B
972 978Right-handed alpha
Helix 25
AC7
B
979 1003Right-handed alpha
Helix 26
AC8
B
1011 1023Right-handed alpha
Helix 27
AC9
B
1024 1026Right-handed 310
Helix 28
AD1
B
1028 1036Right-handed alpha
Helix 29
AD2
B
1040 1045Right-handed alpha
Helix 30
AD3
A
483 494Right-handed alpha
Helix 31
AD4
A
498 503Right-handed alpha
Helix 32
AD5
A
506 535Right-handed alpha
Helix 33
AD6
A
540 559Right-handed alpha
Helix 34
AD7
A
569 587Right-handed alpha
Helix 35
AD8
A
589 611Right-handed alpha
Helix 36
AD9
A
612 620Right-handed 310
Helix 37
AE1
A
621 651Right-handed alpha
Helix 38
AE2
A
658 665Right-handed 310
Helix 39
AE3
A
699 706Right-handed alpha
Helix 40
AE4
A
724 746Right-handed alpha
Helix 41
AE5
A
747 749Right-handed 310
Helix 42
AE6
A
753 763Right-handed alpha
Helix 43
AE7
A
763 780Right-handed alpha
Helix 44
AE8
A
811 817Right-handed alpha
Helix 45
AE9
A
817 840Right-handed alpha
Helix 46
AF1
A
841 845Right-handed 310
Helix 47
AF2
A
851 869Right-handed alpha
Helix 48
AF3
A
877 887Right-handed alpha
Helix 49
AF4
A
911 923Right-handed alpha
Helix 50
AF5
A
926 931Right-handed alpha
Helix 51
AF6
A
934 949Right-handed alpha
Helix 52
AF7
A
953 961Right-handed alpha
Helix 53
AF8
A
972 978Right-handed alpha
Helix 54
AF9
A
979 1003Right-handed alpha
Helix 55
AG1
A
1011 1023Right-handed alpha
Helix 56
AG2
A
1024 1026Right-handed 310
Helix 57
AG3
A
1028 1036Right-handed alpha
Helix 58
AG4
A
1040 1045Right-handed alpha
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There are 6 sheets in PDB entry 9MJO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
566 567first strand
Strand 2
B
875 876anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
668 670first strand
Strand 2
B
709 711anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
889 891first strand
Strand 2
B
903 906anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 567first strand
Strand 2
A
875 876anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
668 670first strand
Strand 2
A
709 711anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
889 891first strand
Strand 2
A
903 906anti-parallel
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