Analysis of interatomic Contacts of Structural Units in PDB entry:
9MKS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MKS entry

There is 1 chain in PDB entry 9MKS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1ARG 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9MKS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 30Right-handed alpha
Helix 2
AA2
A
34 45Right-handed alpha
Helix 3
AA3
A
49 60Right-handed alpha
Helix 4
AA4
A
63 85Right-handed alpha
Helix 5
AA5
A
93 98Right-handed alpha
Helix 6
AA6
A
103 108Right-handed alpha
Helix 7
AA7
A
110 135Right-handed alpha
Helix 8
AA8
A
138 143Right-handed alpha
Helix 9
AA9
A
150 165Right-handed alpha
Helix 10
AB1
A
168 183Right-handed alpha
Helix 11
AB2
A
185 203Right-handed alpha
Helix 12
AB3
A
206 212Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9MKS.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
10 12anti-parallel
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