Analysis of interatomic Contacts of Structural Units in PDB entry:
9MMW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MMW entry

There are 12 chains in PDB entry 9MMW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	MET 1	GLN 612
F	MET 1	GLU 611
Q	A 707	A 707
D	A 709	A 709
G	MET 1	GLN 612
H	MET 1	GLU 611
T	A 707	A 707
I	A 709	A 709
A	MET 1	GLN 612
B	MET 1	GLU 611
C	A 707	A 707
J	A 709	A 709

There are187 helices in PDB entry 9MMW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	13	20	Right-handed alpha
Helix 2	AA2	E	40	53	Right-handed alpha
Helix 3	AA3	E	72	91	Right-handed alpha
Helix 4	AA4	E	93	95	Right-handed 310
Helix 5	AA5	E	105	120	Right-handed alpha
Helix 6	AA6	E	143	154	Right-handed alpha
Helix 7	AA7	E	174	178	Right-handed 310
Helix 8	AA8	E	196	215	Right-handed alpha
Helix 9	AA9	E	224	230	Right-handed 310
Helix 10	AB1	E	231	240	Right-handed alpha
Helix 11	AB2	E	247	254	Right-handed alpha
Helix 12	AB3	E	264	266	Right-handed 310
Helix 13	AB4	E	269	279	Right-handed alpha
Helix 14	AB5	E	282	286	Right-handed 310
Helix 15	AB6	E	305	313	Right-handed alpha
Helix 16	AB7	E	318	323	Right-handed alpha
Helix 17	AB8	E	324	342	Right-handed alpha
Helix 18	AB9	E	352	357	Right-handed 310
Helix 19	AC1	E	362	380	Right-handed alpha
Helix 20	AC2	E	382	386	Right-handed 310
Helix 21	AC3	E	403	420	Right-handed alpha
Helix 22	AC4	E	444	454	Right-handed alpha
Helix 23	AC5	E	468	477	Right-handed alpha
Helix 24	AC6	E	492	502	Right-handed alpha
Helix 25	AC7	E	509	517	Right-handed alpha
Helix 26	AC8	E	532	539	Right-handed alpha
Helix 27	AC9	E	556	568	Right-handed alpha
Helix 28	AD1	E	572	587	Right-handed alpha
Helix 29	AD2	E	590	602	Right-handed alpha
Helix 30	AD3	F	13	19	Right-handed alpha
Helix 31	AD4	F	40	54	Right-handed alpha
Helix 32	AD5	F	72	91	Right-handed alpha
Helix 33	AD6	F	93	95	Right-handed 310
Helix 34	AD7	F	105	120	Right-handed alpha
Helix 35	AD8	F	143	153	Right-handed alpha
Helix 36	AD9	F	174	178	Right-handed 310
Helix 37	AE1	F	196	215	Right-handed alpha
Helix 38	AE2	F	218	222	Right-handed 310
Helix 39	AE3	F	224	230	Right-handed 310
Helix 40	AE4	F	231	239	Right-handed alpha
Helix 41	AE5	F	247	254	Right-handed alpha
Helix 42	AE6	F	264	266	Right-handed 310
Helix 43	AE7	F	269	278	Right-handed alpha
Helix 44	AE8	F	282	286	Right-handed 310
Helix 45	AE9	F	305	313	Right-handed alpha
Helix 46	AF1	F	317	321	Right-handed 310
Helix 47	AF2	F	324	342	Right-handed alpha
Helix 48	AF3	F	352	357	Right-handed 310
Helix 49	AF4	F	362	380	Right-handed alpha
Helix 50	AF5	F	382	386	Right-handed 310
Helix 51	AF6	F	403	420	Right-handed alpha
Helix 52	AF7	F	436	439	Right-handed 310
Helix 53	AF8	F	440	445	Right-handed alpha
Helix 54	AF9	F	448	454	Right-handed alpha
Helix 55	AG1	F	468	477	Right-handed alpha
Helix 56	AG2	F	492	503	Right-handed alpha
Helix 57	AG3	F	509	517	Right-handed alpha
Helix 58	AG4	F	532	539	Right-handed alpha
Helix 59	AG5	F	556	568	Right-handed alpha
Helix 60	AG6	F	572	587	Right-handed alpha
Helix 61	AG7	F	590	602	Right-handed alpha
Helix 62	AG8	G	13	19	Right-handed alpha
Helix 63	AG9	G	37	39	Right-handed 310
Helix 64	AH1	G	40	53	Right-handed alpha
Helix 65	AH2	G	72	91	Right-handed alpha
Helix 66	AH3	G	93	95	Right-handed 310
Helix 67	AH4	G	105	120	Right-handed alpha
Helix 68	AH5	G	143	153	Right-handed alpha
Helix 69	AH6	G	174	178	Right-handed 310
Helix 70	AH7	G	196	215	Right-handed alpha
Helix 71	AH8	G	224	230	Right-handed 310
Helix 72	AH9	G	231	239	Right-handed alpha
Helix 73	AI1	G	247	254	Right-handed alpha
Helix 74	AI2	G	264	266	Right-handed 310
Helix 75	AI3	G	269	279	Right-handed alpha
Helix 76	AI4	G	282	286	Right-handed 310
Helix 77	AI5	G	305	313	Right-handed alpha
Helix 78	AI6	G	318	323	Right-handed alpha
Helix 79	AI7	G	324	342	Right-handed alpha
Helix 80	AI8	G	352	357	Right-handed 310
Helix 81	AI9	G	362	380	Right-handed alpha
Helix 82	AJ1	G	403	420	Right-handed alpha
Helix 83	AJ2	G	440	445	Right-handed 310
Helix 84	AJ3	G	448	454	Right-handed alpha
Helix 85	AJ4	G	468	477	Right-handed alpha
Helix 86	AJ5	G	492	502	Right-handed alpha
Helix 87	AJ6	G	509	517	Right-handed alpha
Helix 88	AJ7	G	532	539	Right-handed alpha
Helix 89	AJ8	G	549	554	Right-handed alpha
Helix 90	AJ9	G	556	568	Right-handed alpha
Helix 91	AK1	G	572	587	Right-handed alpha
Helix 92	AK2	G	590	602	Right-handed alpha
Helix 93	AK3	H	13	19	Right-handed alpha
Helix 94	AK4	H	40	54	Right-handed alpha
Helix 95	AK5	H	72	91	Right-handed alpha
Helix 96	AK6	H	93	95	Right-handed 310
Helix 97	AK7	H	105	120	Right-handed alpha
Helix 98	AK8	H	143	153	Right-handed alpha
Helix 99	AK9	H	196	215	Right-handed alpha
Helix 100	AL1	H	218	222	Right-handed 310
Helix 101	AL2	H	224	230	Right-handed 310
Helix 102	AL3	H	231	240	Right-handed alpha
Helix 103	AL4	H	247	253	Right-handed alpha
Helix 104	AL5	H	264	266	Right-handed 310
Helix 105	AL6	H	269	278	Right-handed alpha
Helix 106	AL7	H	282	286	Right-handed 310
Helix 107	AL8	H	305	313	Right-handed alpha
Helix 108	AL9	H	318	323	Right-handed alpha
Helix 109	AM1	H	324	342	Right-handed alpha
Helix 110	AM2	H	352	357	Right-handed 310
Helix 111	AM3	H	362	381	Right-handed alpha
Helix 112	AM4	H	382	386	Right-handed 310
Helix 113	AM5	H	403	420	Right-handed alpha
Helix 114	AM6	H	440	445	Right-handed 310
Helix 115	AM7	H	448	454	Right-handed alpha
Helix 116	AM8	H	468	477	Right-handed alpha
Helix 117	AM9	H	488	491	Right-handed 310
Helix 118	AN1	H	492	503	Right-handed alpha
Helix 119	AN2	H	509	517	Right-handed alpha
Helix 120	AN3	H	532	539	Right-handed alpha
Helix 121	AN4	H	556	568	Right-handed alpha
Helix 122	AN5	H	572	587	Right-handed alpha
Helix 123	AN6	H	590	602	Right-handed alpha
Helix 124	AN7	A	13	19	Right-handed alpha
Helix 125	AN8	A	40	53	Right-handed alpha
Helix 126	AN9	A	72	91	Right-handed alpha
Helix 127	AO1	A	93	95	Right-handed 310
Helix 128	AO2	A	105	120	Right-handed alpha
Helix 129	AO3	A	143	154	Right-handed alpha
Helix 130	AO4	A	196	215	Right-handed alpha
Helix 131	AO5	A	218	222	Right-handed 310
Helix 132	AO6	A	224	230	Right-handed 310
Helix 133	AO7	A	231	239	Right-handed alpha
Helix 134	AO8	A	247	254	Right-handed alpha
Helix 135	AO9	A	264	266	Right-handed 310
Helix 136	AP1	A	269	279	Right-handed alpha
Helix 137	AP2	A	282	286	Right-handed 310
Helix 138	AP3	A	306	313	Right-handed alpha
Helix 139	AP4	A	318	323	Right-handed alpha
Helix 140	AP5	A	324	342	Right-handed alpha
Helix 141	AP6	A	352	357	Right-handed 310
Helix 142	AP7	A	362	380	Right-handed alpha
Helix 143	AP8	A	403	420	Right-handed alpha
Helix 144	AP9	A	436	445	Right-handed 310
Helix 145	AQ1	A	448	454	Right-handed alpha
Helix 146	AQ2	A	468	477	Right-handed alpha
Helix 147	AQ3	A	492	503	Right-handed alpha
Helix 148	AQ4	A	509	518	Right-handed alpha
Helix 149	AQ5	A	532	539	Right-handed alpha
Helix 150	AQ6	A	556	568	Right-handed alpha
Helix 151	AQ7	A	572	587	Right-handed alpha
Helix 152	AQ8	A	590	602	Right-handed alpha
Helix 153	AQ9	B	13	19	Right-handed alpha
Helix 154	AR1	B	20	21	Right-handed 310
Helix 155	AR2	B	22	26	Right-handed 310
Helix 156	AR3	B	37	39	Right-handed 310
Helix 157	AR4	B	40	54	Right-handed alpha
Helix 158	AR5	B	72	91	Right-handed alpha
Helix 159	AR6	B	93	95	Right-handed 310
Helix 160	AR7	B	105	120	Right-handed alpha
Helix 161	AR8	B	143	153	Right-handed alpha
Helix 162	AR9	B	174	178	Right-handed 310
Helix 163	AS1	B	196	216	Right-handed alpha
Helix 164	AS2	B	218	222	Right-handed 310
Helix 165	AS3	B	224	230	Right-handed 310
Helix 166	AS4	B	231	239	Right-handed alpha
Helix 167	AS5	B	247	254	Right-handed alpha
Helix 168	AS6	B	264	266	Right-handed 310
Helix 169	AS7	B	269	278	Right-handed alpha
Helix 170	AS8	B	282	286	Right-handed 310
Helix 171	AS9	B	306	313	Right-handed alpha
Helix 172	AT1	B	318	323	Right-handed alpha
Helix 173	AT2	B	324	342	Right-handed alpha
Helix 174	AT3	B	352	357	Right-handed 310
Helix 175	AT4	B	362	380	Right-handed alpha
Helix 176	AT5	B	382	386	Right-handed 310
Helix 177	AT6	B	403	420	Right-handed alpha
Helix 178	AT7	B	440	445	Right-handed alpha
Helix 179	AT8	B	448	454	Right-handed alpha
Helix 180	AT9	B	467	477	Right-handed alpha
Helix 181	AU1	B	488	491	Right-handed 310
Helix 182	AU2	B	492	503	Right-handed alpha
Helix 183	AU3	B	509	517	Right-handed alpha
Helix 184	AU4	B	532	539	Right-handed alpha
Helix 185	AU5	B	556	568	Right-handed alpha
Helix 186	AU6	B	572	587	Right-handed alpha
Helix 187	AU7	B	590	602	Right-handed alpha

There are 17 sheets in PDB entry 9MMW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	60	first strand
Strand 2	E	29	35	parallel
Strand 3	E	3	8	parallel
Strand 4	E	97	100	parallel
Strand 5	E	123	126	parallel
Strand 6	E	159	160	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	60	first strand
Strand 2	E	29	35	parallel
Strand 3	E	63	64	parallel
Strand 4	E	189	192	parallel
Strand 5	E	181	184	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	256	262	first strand
Strand 2	E	344	351	parallel
Strand 3	E	388	397	parallel
Strand 4	E	426	433	parallel
Strand 5	E	457	461	parallel
Strand 6	E	482	484	parallel
Strand 7	E	505	508	parallel
Strand 8	E	543	545	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	29	35	parallel
Strand 3	F	3	7	parallel
Strand 4	F	97	100	parallel
Strand 5	F	121	129	parallel
Strand 6	F	156	164	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	60	first strand
Strand 2	F	29	35	parallel
Strand 3	F	63	64	parallel
Strand 4	F	189	192	parallel
Strand 5	F	181	184	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	256	262	first strand
Strand 2	F	344	351	parallel
Strand 3	F	388	397	parallel
Strand 4	F	426	433	parallel
Strand 5	F	457	462	parallel
Strand 6	F	482	485	parallel
Strand 7	F	505	508	parallel
Strand 8	F	542	545	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	58	60	first strand
Strand 2	G	29	35	parallel
Strand 3	G	3	8	parallel
Strand 4	G	97	100	parallel
Strand 5	G	123	126	parallel
Strand 6	G	159	160	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	58	60	first strand
Strand 2	G	29	35	parallel
Strand 3	G	63	64	parallel
Strand 4	G	188	192	parallel
Strand 5	G	181	185	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	256	262	first strand
Strand 2	G	344	351	parallel
Strand 3	G	388	396	parallel
Strand 4	G	426	432	parallel
Strand 5	G	457	461	parallel
Strand 6	G	482	484	parallel
Strand 7	G	505	508	parallel
Strand 8	G	543	545	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	29	35	parallel
Strand 3	H	3	7	parallel
Strand 4	H	97	100	parallel
Strand 5	H	121	129	parallel
Strand 6	H	156	164	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	60	first strand
Strand 2	H	29	35	parallel
Strand 3	H	63	64	parallel
Strand 4	H	188	192	parallel
Strand 5	H	181	185	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	256	262	first strand
Strand 2	H	344	351	parallel
Strand 3	H	388	397	parallel
Strand 4	H	426	433	parallel
Strand 5	H	457	460	parallel
Strand 6	H	482	484	parallel
Strand 7	H	505	508	parallel
Strand 8	H	542	545	parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	160	first strand
Strand 2	A	123	129	anti-parallel
Strand 3	A	97	100	parallel
Strand 4	A	3	8	parallel
Strand 5	A	29	34	parallel
Strand 6	A	58	64	parallel
Strand 7	A	188	192	parallel
Strand 8	A	181	184	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	262	first strand
Strand 2	A	344	351	parallel
Strand 3	A	388	397	parallel
Strand 4	A	426	433	parallel
Strand 5	A	457	461	parallel
Strand 6	A	482	484	parallel
Strand 7	A	505	508	parallel
Strand 8	A	543	545	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	60	first strand
Strand 2	B	29	33	parallel
Strand 3	B	3	7	parallel
Strand 4	B	97	100	parallel
Strand 5	B	123	129	parallel
Strand 6	B	156	160	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	64	first strand
Strand 2	B	189	192	parallel
Strand 3	B	181	184	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	262	first strand
Strand 2	B	344	351	parallel
Strand 3	B	388	397	parallel
Strand 4	B	426	433	parallel
Strand 5	B	457	462	parallel
Strand 6	B	482	485	parallel
Strand 7	B	505	508	parallel
Strand 8	B	543	545	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MMW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MMW