Analysis of interatomic Contacts of Structural Units in PDB entry:
9MMZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9MMZ entry

There are 7 chains in PDB entry 9MMZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	LEU 524
B	ALA 2	LEU 524
C	ALA 2	LEU 524
D	ALA 2	LEU 524
E	ALA 2	LEU 524
F	ALA 2	LEU 524
H	ALA 2	LEU 524

There are126 helices in PDB entry 9MMZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	29	Right-handed alpha
Helix 2	AA2	A	52	60	Right-handed alpha
Helix 3	AA3	A	64	86	Right-handed alpha
Helix 4	AA4	A	88	109	Right-handed alpha
Helix 5	AA5	A	112	135	Right-handed alpha
Helix 6	AA6	A	140	152	Right-handed alpha
Helix 7	AA7	A	155	170	Right-handed alpha
Helix 8	AA8	A	201	205	Right-handed 310
Helix 9	AA9	A	282	297	Right-handed alpha
Helix 10	AB1	A	363	375	Right-handed alpha
Helix 11	AB2	A	385	410	Right-handed alpha
Helix 12	AB3	A	416	425	Right-handed alpha
Helix 13	AB4	A	433	444	Right-handed alpha
Helix 14	AB5	A	445	447	Right-handed 310
Helix 15	AB6	A	448	458	Right-handed alpha
Helix 16	AB7	A	461	471	Right-handed alpha
Helix 17	AB8	A	488	492	Right-handed alpha
Helix 18	AB9	A	497	516	Right-handed alpha
Helix 19	AC1	B	9	29	Right-handed alpha
Helix 20	AC2	B	52	60	Right-handed alpha
Helix 21	AC3	B	64	86	Right-handed alpha
Helix 22	AC4	B	88	109	Right-handed alpha
Helix 23	AC5	B	112	135	Right-handed alpha
Helix 24	AC6	B	140	152	Right-handed alpha
Helix 25	AC7	B	155	170	Right-handed alpha
Helix 26	AC8	B	201	205	Right-handed 310
Helix 27	AC9	B	282	297	Right-handed alpha
Helix 28	AD1	B	363	375	Right-handed alpha
Helix 29	AD2	B	385	410	Right-handed alpha
Helix 30	AD3	B	416	425	Right-handed alpha
Helix 31	AD4	B	433	444	Right-handed alpha
Helix 32	AD5	B	445	447	Right-handed 310
Helix 33	AD6	B	448	458	Right-handed alpha
Helix 34	AD7	B	461	471	Right-handed alpha
Helix 35	AD8	B	488	492	Right-handed alpha
Helix 36	AD9	B	497	516	Right-handed alpha
Helix 37	AE1	C	9	29	Right-handed alpha
Helix 38	AE2	C	52	60	Right-handed alpha
Helix 39	AE3	C	64	86	Right-handed alpha
Helix 40	AE4	C	88	109	Right-handed alpha
Helix 41	AE5	C	112	135	Right-handed alpha
Helix 42	AE6	C	140	152	Right-handed alpha
Helix 43	AE7	C	155	170	Right-handed alpha
Helix 44	AE8	C	201	205	Right-handed 310
Helix 45	AE9	C	282	297	Right-handed alpha
Helix 46	AF1	C	363	375	Right-handed alpha
Helix 47	AF2	C	385	410	Right-handed alpha
Helix 48	AF3	C	416	425	Right-handed alpha
Helix 49	AF4	C	433	444	Right-handed alpha
Helix 50	AF5	C	445	447	Right-handed 310
Helix 51	AF6	C	448	458	Right-handed alpha
Helix 52	AF7	C	461	471	Right-handed alpha
Helix 53	AF8	C	488	492	Right-handed alpha
Helix 54	AF9	C	497	516	Right-handed alpha
Helix 55	AG1	D	9	29	Right-handed alpha
Helix 56	AG2	D	52	60	Right-handed alpha
Helix 57	AG3	D	64	86	Right-handed alpha
Helix 58	AG4	D	88	109	Right-handed alpha
Helix 59	AG5	D	112	135	Right-handed alpha
Helix 60	AG6	D	140	152	Right-handed alpha
Helix 61	AG7	D	155	170	Right-handed alpha
Helix 62	AG8	D	201	205	Right-handed 310
Helix 63	AG9	D	282	297	Right-handed alpha
Helix 64	AH1	D	363	375	Right-handed alpha
Helix 65	AH2	D	385	410	Right-handed alpha
Helix 66	AH3	D	416	425	Right-handed alpha
Helix 67	AH4	D	433	444	Right-handed alpha
Helix 68	AH5	D	445	447	Right-handed 310
Helix 69	AH6	D	448	458	Right-handed alpha
Helix 70	AH7	D	461	471	Right-handed alpha
Helix 71	AH8	D	488	492	Right-handed alpha
Helix 72	AH9	D	497	516	Right-handed alpha
Helix 73	AI1	E	9	29	Right-handed alpha
Helix 74	AI2	E	52	60	Right-handed alpha
Helix 75	AI3	E	64	86	Right-handed alpha
Helix 76	AI4	E	88	109	Right-handed alpha
Helix 77	AI5	E	112	135	Right-handed alpha
Helix 78	AI6	E	140	152	Right-handed alpha
Helix 79	AI7	E	155	170	Right-handed alpha
Helix 80	AI8	E	201	205	Right-handed 310
Helix 81	AI9	E	282	297	Right-handed alpha
Helix 82	AJ1	E	363	375	Right-handed alpha
Helix 83	AJ2	E	385	410	Right-handed alpha
Helix 84	AJ3	E	416	425	Right-handed alpha
Helix 85	AJ4	E	433	444	Right-handed alpha
Helix 86	AJ5	E	445	447	Right-handed 310
Helix 87	AJ6	E	448	458	Right-handed alpha
Helix 88	AJ7	E	461	471	Right-handed alpha
Helix 89	AJ8	E	488	492	Right-handed alpha
Helix 90	AJ9	E	497	516	Right-handed alpha
Helix 91	AK1	F	9	29	Right-handed alpha
Helix 92	AK2	F	52	60	Right-handed alpha
Helix 93	AK3	F	64	86	Right-handed alpha
Helix 94	AK4	F	88	109	Right-handed alpha
Helix 95	AK5	F	112	135	Right-handed alpha
Helix 96	AK6	F	140	152	Right-handed alpha
Helix 97	AK7	F	155	170	Right-handed alpha
Helix 98	AK8	F	201	205	Right-handed 310
Helix 99	AK9	F	282	297	Right-handed alpha
Helix 100	AL1	F	363	375	Right-handed alpha
Helix 101	AL2	F	385	410	Right-handed alpha
Helix 102	AL3	F	416	425	Right-handed alpha
Helix 103	AL4	F	433	444	Right-handed alpha
Helix 104	AL5	F	445	447	Right-handed 310
Helix 105	AL6	F	448	458	Right-handed alpha
Helix 106	AL7	F	461	471	Right-handed alpha
Helix 107	AL8	F	488	492	Right-handed alpha
Helix 108	AL9	F	497	516	Right-handed alpha
Helix 109	AM1	H	9	29	Right-handed alpha
Helix 110	AM2	H	52	60	Right-handed alpha
Helix 111	AM3	H	64	86	Right-handed alpha
Helix 112	AM4	H	88	109	Right-handed alpha
Helix 113	AM5	H	112	135	Right-handed alpha
Helix 114	AM6	H	140	152	Right-handed alpha
Helix 115	AM7	H	155	170	Right-handed alpha
Helix 116	AM8	H	201	205	Right-handed 310
Helix 117	AM9	H	282	297	Right-handed alpha
Helix 118	AN1	H	363	375	Right-handed alpha
Helix 119	AN2	H	385	410	Right-handed alpha
Helix 120	AN3	H	416	425	Right-handed alpha
Helix 121	AN4	H	433	444	Right-handed alpha
Helix 122	AN5	H	445	447	Right-handed 310
Helix 123	AN6	H	448	458	Right-handed alpha
Helix 124	AN7	H	461	471	Right-handed alpha
Helix 125	AN8	H	488	492	Right-handed alpha
Helix 126	AN9	H	497	516	Right-handed alpha

There are 42 sheets in PDB entry 9MMZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	8	first strand
Strand 2	A	517	522	anti-parallel
Strand 3	B	37	42	parallel
Strand 4	B	45	50	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	50	first strand
Strand 2	A	37	42	anti-parallel
Strand 3	H	517	522	parallel
Strand 4	H	5	8	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	179	first strand
Strand 2	A	376	381	parallel
Strand 3	A	186	190	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	195	first strand
Strand 2	A	330	332	anti-parallel
Strand 3	A	322	325	anti-parallel
Strand 4	A	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	249	251	parallel
Strand 3	A	219	223	parallel
Strand 4	A	318	319	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	411	413	first strand
Strand 2	A	494	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	476	479	first strand
Strand 2	A	484	487	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	8	first strand
Strand 2	B	517	522	anti-parallel
Strand 3	C	37	42	parallel
Strand 4	C	45	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	179	first strand
Strand 2	B	376	381	parallel
Strand 3	B	186	190	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	195	first strand
Strand 2	B	330	332	anti-parallel
Strand 3	B	322	325	anti-parallel
Strand 4	B	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	277	first strand
Strand 2	B	249	251	parallel
Strand 3	B	219	223	parallel
Strand 4	B	318	319	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	413	first strand
Strand 2	B	494	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	476	479	first strand
Strand 2	B	484	487	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	8	first strand
Strand 2	C	517	522	anti-parallel
Strand 3	D	37	42	parallel
Strand 4	D	45	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	179	first strand
Strand 2	C	376	381	parallel
Strand 3	C	186	190	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	195	first strand
Strand 2	C	330	332	anti-parallel
Strand 3	C	322	325	anti-parallel
Strand 4	C	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	277	first strand
Strand 2	C	249	251	parallel
Strand 3	C	219	223	parallel
Strand 4	C	318	319	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	411	413	first strand
Strand 2	C	494	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	476	479	first strand
Strand 2	C	484	487	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	8	first strand
Strand 2	D	517	522	anti-parallel
Strand 3	E	37	42	parallel
Strand 4	E	45	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	174	179	first strand
Strand 2	D	376	381	parallel
Strand 3	D	186	190	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	193	195	first strand
Strand 2	D	330	332	anti-parallel
Strand 3	D	322	325	anti-parallel
Strand 4	D	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	277	first strand
Strand 2	D	249	251	parallel
Strand 3	D	219	223	parallel
Strand 4	D	318	319	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	411	413	first strand
Strand 2	D	494	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	476	479	first strand
Strand 2	D	484	487	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	8	first strand
Strand 2	E	517	522	anti-parallel
Strand 3	F	37	42	parallel
Strand 4	F	45	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	174	179	first strand
Strand 2	E	376	381	parallel
Strand 3	E	186	190	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	193	195	first strand
Strand 2	E	330	332	anti-parallel
Strand 3	E	322	325	anti-parallel
Strand 4	E	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	275	277	first strand
Strand 2	E	249	251	parallel
Strand 3	E	219	223	parallel
Strand 4	E	318	319	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	411	413	first strand
Strand 2	E	494	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	476	479	first strand
Strand 2	E	484	487	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	8	first strand
Strand 2	F	517	522	anti-parallel
Strand 3	H	37	42	parallel
Strand 4	H	45	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	174	179	first strand
Strand 2	F	376	381	parallel
Strand 3	F	186	190	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	193	195	first strand
Strand 2	F	330	332	anti-parallel
Strand 3	F	322	325	anti-parallel
Strand 4	F	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	275	277	first strand
Strand 2	F	249	251	parallel
Strand 3	F	219	223	parallel
Strand 4	F	318	319	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	411	413	first strand
Strand 2	F	494	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	476	479	first strand
Strand 2	F	484	487	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	174	179	first strand
Strand 2	H	376	381	parallel
Strand 3	H	186	190	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	193	195	first strand
Strand 2	H	330	332	anti-parallel
Strand 3	H	322	325	anti-parallel
Strand 4	H	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	275	277	first strand
Strand 2	H	249	251	parallel
Strand 3	H	219	223	parallel
Strand 4	H	318	319	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	411	413	first strand
Strand 2	H	494	496	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	476	479	first strand
Strand 2	H	484	487	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9MMZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9MMZ