Analysis of interatomic Contacts of Structural Units in PDB entry:
9MN5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9MN5 entry

There are 4 chains in PDB entry 9MN5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 42THR 233
B
 PHE 71GLU 394
E
 TRP 122SER 1230
N
 T 1 T 1
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 9MN5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 71Right-handed alpha
Helix 2
AA2
A
75 90Right-handed alpha
Helix 3
AA3
A
91 120Right-handed alpha
Helix 4
AA4
A
121 151Right-handed alpha
Helix 5
AA5
A
159 169Right-handed alpha
Helix 6
AA6
A
176 191Right-handed alpha
Helix 7
AA7
A
192 225Right-handed alpha
Helix 8
AA8
B
78 89Right-handed alpha
Helix 9
AA9
B
108 117Right-handed alpha
Helix 10
AB1
B
126 128Right-handed 310
Helix 11
AB2
B
129 136Right-handed alpha
Helix 12
AB3
B
168 177Right-handed alpha
Helix 13
AB4
B
199 213Right-handed alpha
Helix 14
AB5
B
215 220Right-handed 310
Helix 15
AB6
B
231 237Right-handed alpha
Helix 16
AB7
B
248 257Right-handed alpha
Helix 17
AB8
B
269 271Right-handed 310
Helix 18
AB9
B
283 293Right-handed alpha
Helix 19
AC1
B
316 329Right-handed alpha
Helix 20
AC2
B
334 343Right-handed alpha
Helix 21
AC3
B
346 355Right-handed alpha
Helix 22
AC4
B
366 380Right-handed alpha
Helix 23
AC5
B
390 394Right-handed 310
Helix 24
AC6
E
123 146Right-handed alpha
Helix 25
AC7
E
150 155Right-handed alpha
Helix 26
AC8
E
170 174Right-handed 310
Helix 27
AC9
E
190 195Right-handed 310
Helix 28
AD1
E
221 236Right-handed alpha
Helix 29
AD2
E
238 252Right-handed alpha
Helix 30
AD3
E
252 257Right-handed alpha
Helix 31
AD4
E
260 271Right-handed alpha
Helix 32
AD5
E
276 291Right-handed alpha
Helix 33
AD6
E
295 310Right-handed alpha
Helix 34
AD7
E
312 322Right-handed alpha
Helix 35
AD8
E
330 335Right-handed alpha
Helix 36
AD9
E
340 355Right-handed alpha
Helix 37
AE1
E
375 379Right-handed 310
Helix 38
AE2
E
392 409Right-handed alpha
Helix 39
AE3
E
426 461Right-handed alpha
Helix 40
AE4
E
467 472Right-handed alpha
Helix 41
AE5
E
475 489Right-handed alpha
Helix 42
AE6
E
497 520Right-handed alpha
Helix 43
AE7
E
521 534Right-handed alpha
Helix 44
AE8
E
548 556Right-handed alpha
Helix 45
AE9
E
568 587Right-handed alpha
Helix 46
AF1
E
624 634Right-handed alpha
Helix 47
AF2
E
676 687Right-handed alpha
Helix 48
AF3
E
692 704Right-handed alpha
Helix 49
AF4
E
710 723Right-handed alpha
Helix 50
AF5
E
762 789Right-handed alpha
Helix 51
AF6
E
818 824Right-handed alpha
Helix 52
AF7
E
836 850Right-handed alpha
Helix 53
AF8
E
856 867Right-handed alpha
Helix 54
AF9
E
867 877Right-handed alpha
Helix 55
AG1
E
890 906Right-handed alpha
Helix 56
AG2
E
925 936Right-handed alpha
Helix 57
AG3
E
937 944Right-handed alpha
Helix 58
AG4
E
954 972Right-handed alpha
Helix 59
AG5
E
975 981Right-handed alpha
Helix 60
AG6
E
986 999Right-handed alpha
Helix 61
AG7
E
1006 1017Right-handed alpha
Helix 62
AG8
E
1021 1023Right-handed 310
Helix 63
AG9
E
1024 1044Right-handed alpha
Helix 64
AH1
E
1045 1064Right-handed alpha
Helix 65
AH2
E
1111 1117Right-handed alpha
Helix 66
AH3
E
1118 1141Right-handed alpha
Helix 67
AH4
E
1159 1175Right-handed alpha
Helix 68
AH5
E
1178 1191Right-handed alpha
Helix 69
AH6
E
1197 1209Right-handed alpha
Helix 70
AH7
E
1218 1225Right-handed 310
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There are 11 sheets in PDB entry 9MN5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 148first strand
Strand 2
B
121 124parallel
Strand 3
B
99 101parallel
Strand 4
B
190 192parallel
Strand 5
B
225 226parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 230first strand
Strand 2
B
295 303anti-parallel
Strand 3
B
258 267anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
411 415first strand
Strand 2
E
638 642anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
495 496first strand
Strand 2
E
616 623anti-parallel
Strand 3
E
606 613anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
588 590first strand
Strand 2
E
602 604anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
707 709first strand
Strand 2
E
825 827anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
798 800first strand
Strand 2
E
806 808anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
831 832first strand
Strand 2
E
914 915anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
918 921first strand
Strand 2
E
1152 1156anti-parallel
Strand 3
E
1147 1149anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1069 1071first strand
Strand 2
E
1077 1079anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1088 1091first strand
Strand 2
E
1098 1101anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il